RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ERLIN1O75477 346 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 FECHP22830 423 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 PPARAQ07869 468 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 NAPGQ99747 312 aaPredicted RBP12.36□□□□□ -0.43
SNIP1-204ENST00000638725 PHF20Q9BVI0 1012 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 XDHP47989 1333 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 ITIH6Q6UXX5 1313 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 N4BP3O15049 544 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 SEC23AQ15436 765 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 CCDC51Q96ER9 411 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 TAB2Q9NYJ8 693 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 CTAGE15A4D2H0 777 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 CTAGE8P0CG41 777 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 XBP1P17861 261 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 GNAT2P19087 354 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 BCAMP50895 628 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 RCAN1P53805 252 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 CTAGE6Q86UF2 777 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 CTAGE4Q8IX94 777 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 NUP88Q99567 741 aaPredicted RBP12.35□□□□□ -0.43
SNIP1-204ENST00000638725 SLF1Q9BQI6 1058 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 RNF41Q9H4P4 317 aaPredicted RBP12.35□□□□□ -0.43
SNIP1-204ENST00000638725 LCMT1Q9UIC8 334 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 FAN1Q9Y2M0 1017 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 TUBB2AQ13885 445 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 RRAGBQ5VZM2 374 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 NOA1Q8NC60 698 aaKnown RBP12.35□□□□□ -0.43
SNIP1-204ENST00000638725 FERMT2Q96AC1 680 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 TUBB2BQ9BVA1 445 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 CARD10Q9BWT7 1032 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
SNIP1-204ENST00000638725 BCL9LQ86UU0 1499 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 ACTN2P35609 894 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 FUT2Q10981 343 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
SNIP1-204ENST00000638725 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 MTA3Q9BTC8 594 aa12.35□□□□□ -0.43
SNIP1-204ENST00000638725 LIMA1Q9UHB6 759 aaKnown RBP12.35□□□□□ -0.43
SNIP1-204ENST00000638725 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 LRP5O75197 1615 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 RTL9Q8NET4 1388 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 EIF3JO75822 258 aaKnown RBP12.34□□□□□ -0.43
SNIP1-204ENST00000638725 COPB1P53618 953 aaKnown RBP12.34□□□□□ -0.43
SNIP1-204ENST00000638725 SLC20A2Q08357 652 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 CASP8Q14790 479 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 TTC38Q5R3I4 469 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
SNIP1-204ENST00000638725 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.34□□□□□ -0.43
SNIP1-204ENST00000638725 LRP2BPQ9P2M1 347 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 TRIM10Q9UDY6 481 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 BCORQ6W2J9 1755 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 KRT9P35527 623 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 PTGDRQ13258 359 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 CYP26C1Q6V0L0 522 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 CADPS2Q86UW7 1296 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
SNIP1-204ENST00000638725 SLC4A9Q96Q91 983 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 MTRQ99707 1265 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 TSPYL1Q9H0U9 437 aa12.34□□□□□ -0.43
SNIP1-204ENST00000638725 IQSEC3Q9UPP2 1182 aaPredicted RBP12.34□□□□□ -0.43
SNIP1-204ENST00000638725 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 DCCP43146 1447 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
SNIP1-204ENST00000638725 PHACTR2O75167 634 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 CYP7A1P22680 504 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 AMPD2Q01433 879 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 NPY5RQ15761 445 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 E2F4Q16254 413 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 ESR2Q92731 530 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 TNFRSF25Q93038 417 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 CCDC102AQ96A19 550 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 CHP1Q99653 195 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 CWC15Q9P013 229 aaKnown RBP12.33□□□□□ -0.44
SNIP1-204ENST00000638725 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 MAPK8IP1Q9UQF2 711 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 MYO1CO00159 1063 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 TRIM66O15016 1216 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 BMP15O95972 392 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
SNIP1-204ENST00000638725 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
SNIP1-204ENST00000638725 PIP4K2BP78356 416 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 ATP2C1P98194 919 aaPredicted RBP12.33□□□□□ -0.44
SNIP1-204ENST00000638725 PAK1Q13153 545 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 RNF216Q9NWF9 866 aaPredicted RBP12.33□□□□□ -0.44
SNIP1-204ENST00000638725 GUCA1BQ9UMX6 200 aa12.33□□□□□ -0.44
SNIP1-204ENST00000638725 REXO2Q9Y3B8 237 aaKnown RBP12.33□□□□□ -0.44
SNIP1-204ENST00000638725 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms