RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 CCDC85CA6NKD9 419 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 RANBP6O60518 1105 aaKnown RBP14.86□□□□□ -0.03
CLN6-225ENST00000638144 FMNL1O95466 1100 aaPredicted RBP14.86□□□□□ -0.03
CLN6-225ENST00000638144 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 FBXO46Q6PJ61 603 aaPredicted RBP14.86□□□□□ -0.03
CLN6-225ENST00000638144 NUP88Q99567 741 aaPredicted RBP14.86□□□□□ -0.03
CLN6-225ENST00000638144 VCPKMTQ9H867 229 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 ZNF287Q9HBT7 754 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 ANAPC4Q9UJX5 808 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 HPS5Q9UPZ3 1129 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 TMX2Q9Y320 296 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 PTCH2Q9Y6C5 1203 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 ZMYM6O95789 1325 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 NEDD4P46934 1319 aa14.86□□□□□ -0.03
CLN6-225ENST00000638144 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 TSPY2A6NKD2 308 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 PTH1RQ03431 593 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 FAM110CQ1W6H9 321 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 CATSPERGQ6ZRH7 1159 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 RASGRP2Q7LDG7 609 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 SH2D4AQ9H788 454 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 CLIP2Q9UDT6 1046 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 PTPN22Q9Y2R2 807 aa14.85□□□□□ -0.03
CLN6-225ENST00000638144 COL11A1P12107 1806 aaPredicted RBP14.85□□□□□ -0.03
CLN6-225ENST00000638144 A0A0G2JMZ2 1700 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 SPDYE16A6NNV3 312 aaPredicted RBP14.84□□□□□ -0.03
CLN6-225ENST00000638144 GCLCP48506 637 aaPredicted RBP14.84□□□□□ -0.03
CLN6-225ENST00000638144 FAM83BQ5T0W9 1011 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 IFFO2Q5TF58 517 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 NEDD1Q8NHV4 660 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 DSCC1Q9BVC3 393 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 MTMR4Q9NYA4 1195 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 NYAP2Q9P242 653 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 GABRQQ9UN88 632 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 RAD50Q92878 1312 aa14.84□□□□□ -0.03
CLN6-225ENST00000638144 SGSM2O43147 1006 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 ORC4O43929 436 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 CNMDO75829 334 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 FLOT1O75955 427 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 MYCP01106 439 aaPredicted RBP14.83□□□□□ -0.04
CLN6-225ENST00000638144 FCGRTP55899 365 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 PRKCZQ05513 592 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 PKN2Q16513 984 aaKnown RBP14.83□□□□□ -0.04
CLN6-225ENST00000638144 AKNAD1Q5T1N1 836 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 RUFY2Q8WXA3 655 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 IL17RBQ9NRM6 502 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 STX8Q9UNK0 236 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 MTMR7Q9Y216 660 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 MYPNQ86TC9 1320 aa14.83□□□□□ -0.04
CLN6-225ENST00000638144 ZNF213O14771 459 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 TNPO2O14787 897 aaKnown RBP14.82□□□□□ -0.04
CLN6-225ENST00000638144 WDR46O15213 610 aaKnown RBP14.82□□□□□ -0.04
CLN6-225ENST00000638144 TTLL1O95922 423 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 NDUFB10O96000 172 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 ERVK-9P63128 1117 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 ERVK-24P63145 666 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 Q3C1V9 767 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 BMP2KLQ5H9B9 411 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 MFSD6Q6ZSS7 791 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 STAG1Q8WVM7 1258 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 LPAR1Q92633 364 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 ATG4CQ96DT6 458 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 PORCNQ9H237 461 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 PPP4R2Q9NY27 417 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 BTBD7Q9P203 1132 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 MORF4L1Q9UBU8 362 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 SRRDQ9UH36 339 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 ISY1Q9ULR0 285 aaKnown RBP14.82□□□□□ -0.04
CLN6-225ENST00000638144 PLXNB2O15031 1838 aa14.82□□□□□ -0.04
CLN6-225ENST00000638144 KIAA0100Q14667 2235 aaKnown RBP14.81□□□□□ -0.04
CLN6-225ENST00000638144 F5H6K3 240 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 FGRP09769 529 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 SOX10P56693 466 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 KLRC3Q07444 240 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 SH3TC2Q8TF17 1288 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 ZKSCAN3Q9BRR0 538 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 TAF6LQ9Y6J9 622 aa14.81□□□□□ -0.04
CLN6-225ENST00000638144 B4E1Z4 1266 aa14.8□□□□□ -0.04
CLN6-225ENST00000638144 ARHGEF6Q15052 776 aa14.8□□□□□ -0.04
CLN6-225ENST00000638144 IMMTQ16891 758 aaKnown RBP14.8□□□□□ -0.04
CLN6-225ENST00000638144 WDR78Q5VTH9 848 aa14.8□□□□□ -0.04
CLN6-225ENST00000638144 ESYT1Q9BSJ8 1104 aa14.8□□□□□ -0.04
CLN6-225ENST00000638144 KDM4AO75164 1064 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 DSG3P32926 999 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 FLT3LGP49771 235 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 PLS1Q14651 629 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 COG2Q14746 738 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 SLC9C1Q4G0N8 1177 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms