RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CTTNBP2NLQ9P2B4 639 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 FAM8A1Q9UBU6 413 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 IFNB1P01574 187 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 RIMS2Q9UQ26 1411 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 ATF7P17544 494 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 UVSSAQ2YD98 709 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 THRAP3Q9Y2W1 955 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 PCDH11XQ9BZA7 1347 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 PCDH11YQ9BZA8 1340 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 GUCY2FP51841 1108 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 KLHL40Q2TBA0 621 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 ARHGEF16Q5VV41 709 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 FAM227BQ96M60 508 aa18.78■□□□□ 0.6
CACNA1A-253ENST00000637927 NPR1P16066 1061 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 HOXC9P31274 260 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 GBP1P32455 592 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 ECE1P42892 770 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 TRAF1Q13077 416 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 DOK7Q18PE1 504 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 TRIM50Q86XT4 487 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 LMCD1Q9NZU5 365 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 SUGT1Q9Y2Z0 365 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 NPATQ14207 1427 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 U2AF2P26368 475 aaKnown RBP eCLIP18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 SMAD1Q15797 465 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 GDAP1Q8TB36 358 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 EXT2Q93063 718 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 I3L4J1 428 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 UBXN2AP68543 259 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 TMEM259Q4ZIN3 620 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 CCDC105Q8IYK2 499 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 KDM5BQ9UGL1 1544 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 KCNJ14Q9UNX9 436 aa18.77■□□□□ 0.6
CACNA1A-253ENST00000637927 PALM3A6NDB9 673 aaPredicted RBP18.77■□□□□ 0.59
CACNA1A-253ENST00000637927 OTUD7AQ8TE49 926 aaPredicted RBP18.77■□□□□ 0.59
CACNA1A-253ENST00000637927 GCP02774 474 aa18.77■□□□□ 0.59
CACNA1A-253ENST00000637927 RLBP1P12271 317 aa18.77■□□□□ 0.59
CACNA1A-253ENST00000637927 RBSNQ9H1K0 784 aa18.77■□□□□ 0.59
CACNA1A-253ENST00000637927 FAM173BQ6P4H8 233 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 DHX32Q7L7V1 743 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 PALM2Q8IXS6 379 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 MMEL1Q495T6 779 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 PHEXP78562 749 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 FAM76AQ8TAV0 307 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 YIPF2Q9BWQ6 316 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 ANGPTL3Q9Y5C1 460 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 GOLGA8CPA6NN73 597 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 ALDH1L1O75891 902 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 SCNN1DP51172 638 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 GOLGA8FQ08AF8 430 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 GOLGA8DPQ0D2H9 430 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 PNMA8AQ86V59 439 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 RSRC1Q96IZ7 334 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 TSPYL2Q9H2G4 693 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 CEP104O60308 925 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 TBC1D12O60347 775 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 SLC7A5P2Q9GIP4 190 aa18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 ABT1Q9ULW3 272 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-253ENST00000637927 F5H423 210 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 COG7P83436 770 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 LUC7L2Q9Y383 392 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 DNM2P50570 870 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 KRT12Q99456 494 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 PTPN22Q9Y2R2 807 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 ASXL1Q8IXJ9 1541 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 THOC2Q8NI27 1593 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 TTC6Q86TZ1 520 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 LGR6Q9HBX8 967 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 CALUO43852 315 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 PPP4R1Q8TF05 950 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 FGD4Q96M96 766 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 RAB3IPQ96QF0 476 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 MAP10Q9P2G4 905 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 ZBED4O75132 1171 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 DLATP10515 647 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 PPP2R5EQ16537 467 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 NCAPGQ9BPX3 1015 aa18.75■□□□□ 0.59
CACNA1A-253ENST00000637927 CLNS1AP54105 237 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 VSIG1Q86XK7 387 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 KIAA0586Q9BVV6 1533 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 RNASELQ05823 741 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 TBCCQ15814 346 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 EEPD1Q7L9B9 569 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 CACNA2D3Q8IZS8 1091 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 ATP6V1E2Q96A05 226 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 SLITRK6Q9H5Y7 841 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 SAMSN1Q9NSI8 373 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 MAD1L1Q9Y6D9 718 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 EBAG9O00559 213 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 SLC27A2O14975 620 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 HDAC1Q13547 482 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 PUM3Q15397 648 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 CCDC26Q8TAB7 109 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 SRGAP1Q7Z6B7 1085 aa18.74■□□□□ 0.59
CACNA1A-253ENST00000637927 NSD2O96028 1365 aa18.73■□□□□ 0.59
CACNA1A-253ENST00000637927 SEC24BO95487 1268 aa18.73■□□□□ 0.59
CACNA1A-253ENST00000637927 RILPL1Q5EBL4 403 aa18.73■□□□□ 0.59
CACNA1A-253ENST00000637927 NBPF11Q86T75 865 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms