RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 EPAS1Q99814 870 aa8.85□□□□□ -0.99
CDKL5-211ENST00000637881 NAA15Q9BXJ9 866 aaKnown RBP8.85□□□□□ -0.99
CDKL5-211ENST00000637881 UBA5Q9GZZ9 404 aa8.85□□□□□ -0.99
CDKL5-211ENST00000637881 CENPHQ9H3R5 247 aa8.85□□□□□ -0.99
CDKL5-211ENST00000637881 SUGCTQ9HAC7 445 aa8.85□□□□□ -0.99
CDKL5-211ENST00000637881 CTAGE9A4FU28 777 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 GOLGA6BA6NDN3 693 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 PTCD1O75127 700 aaKnown RBP8.84□□□□□ -0.99
CDKL5-211ENST00000637881 RNF8O76064 485 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 TOP1P11387 765 aaKnown RBP8.84□□□□□ -0.99
CDKL5-211ENST00000637881 RANBP1P43487 201 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 USP14P54578 494 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 NLRP12P59046 1061 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 APBA1Q02410 837 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 NKX1-1Q15270 411 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-211ENST00000637881 ANKRD1Q15327 319 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 TAF7Q15545 349 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-211ENST00000637881 NAA35Q5VZE5 725 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 C1orf131Q8NDD1 294 aaKnown RBP8.84□□□□□ -0.99
CDKL5-211ENST00000637881 ENGASEQ8NFI3 743 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 LZICQ8WZA0 190 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 PIGBQ92521 554 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 RMI1Q9H9A7 625 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 SLC52A2Q9HAB3 445 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 RCOR1Q9UKL0 485 aa8.84□□□□□ -0.99
CDKL5-211ENST00000637881 ERVV-2B6SEH9 535 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 ELL2O00472 640 aaPredicted RBP8.84□□□□□ -1
CDKL5-211ENST00000637881 KCNQ3O43525 872 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 BUB1BO60566 1050 aaPredicted RBP8.84□□□□□ -1
CDKL5-211ENST00000637881 ZNF202O95125 648 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 LARGE1O95461 756 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 OATP04181 439 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 VIMP08670 466 aaKnown RBP8.84□□□□□ -1
CDKL5-211ENST00000637881 CNGA1P29973 690 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 GGCXP38435 758 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 RESTQ13127 1097 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 THEMIS2Q5TEJ8 643 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 ALS2CLQ60I27 953 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 DPY19L2Q6NUT2 758 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 KDM7AQ6ZMT4 941 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 ZNF473Q8WTR7 871 aaKnown RBP8.84□□□□□ -1
CDKL5-211ENST00000637881 CUL5Q93034 780 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 RMDN2Q96LZ7 410 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 SCLT1Q96NL6 688 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 TSPYL4Q9UJ04 414 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 ASAP1Q9ULH1 1129 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 SAMM50Q9Y512 469 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 CYP46A1Q9Y6A2 500 aa8.84□□□□□ -1
CDKL5-211ENST00000637881 PARP4Q9UKK3 1724 aaKnown RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 B4DLN1 442 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 AGPSO00116 658 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 NPTXRO95502 500 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 ATP6V1G2O95670 118 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 APBA3O96018 575 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 IFIT2P09913 472 aaKnown RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 RHOXF2BP0C7M4 288 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 KCNQ4P56696 695 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 CMPK2Q5EBM0 449 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 RNF187Q5TA31 235 aaPredicted RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 ARMC9Q7Z3E5 817 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 CCDC125Q86Z20 511 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 GBP7Q8N8V2 638 aaPredicted RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 NSMCE1Q8WV22 266 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 NAPGQ99747 312 aaPredicted RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 RHOXF2Q9BQY4 288 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 LSG1Q9H089 658 aaKnown RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 MMADHCQ9H3L0 296 aaPredicted RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 NOP53Q9NZM5 478 aaKnown RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 ZFATQ9P243 1243 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 PUF60Q9UHX1 559 aaKnown RBP8.83□□□□□ -1
CDKL5-211ENST00000637881 RIPOR2Q9Y4F9 1068 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 GMEB1Q9Y692 573 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 DLG5Q8TDM6 1919 aa8.83□□□□□ -1
CDKL5-211ENST00000637881 RBM47A0AV96 593 aaKnown RBP8.82□□□□□ -1
CDKL5-211ENST00000637881 CREB3O43889 395 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 PPP1R12BO60237 982 aaPredicted RBP8.82□□□□□ -1
CDKL5-211ENST00000637881 PENKP01210 267 aaPredicted RBP8.82□□□□□ -1
CDKL5-211ENST00000637881 GNAT1P11488 350 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 YY1P25490 414 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 ST3GAL1Q11201 340 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 NCAPHQ15003 741 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 E2F5Q15329 346 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 TTC5Q8N0Z6 440 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 SDR16C5Q8N3Y7 309 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 ACRBPQ8NEB7 543 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 TRIM4Q9C037 500 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 YIPF3Q9GZM5 350 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 ANKIB1Q9P2G1 1089 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 LRRC37A3O60309 1634 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 UBN2Q6ZU65 1347 aa8.82□□□□□ -1
CDKL5-211ENST00000637881 THSD7AQ9UPZ6 1657 aa8.81□□□□□ -1
CDKL5-211ENST00000637881 A0A1W2PQ27 194 aa8.81□□□□□ -1
CDKL5-211ENST00000637881 A0A1W2PQ64 194 aa8.81□□□□□ -1
CDKL5-211ENST00000637881 A0A1W2PQD8 194 aa8.81□□□□□ -1
CDKL5-211ENST00000637881 RASSF10A6NK89 507 aa8.81□□□□□ -1
CDKL5-211ENST00000637881 FAM107AO95990 144 aa8.81□□□□□ -1
CDKL5-211ENST00000637881 GSTA1P08263 222 aa8.81□□□□□ -1
CDKL5-211ENST00000637881 RPSAP08865 295 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms