RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 SAGE1Q9NXZ1 904 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 ZSWIM5Q9P217 1185 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 CLIP2Q9UDT6 1046 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 STX8Q9UNK0 236 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 AGTPBP1Q9UPW5 1226 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 SLC45A1Q9Y2W3 748 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 SNX14Q9Y5W7 946 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 COL11A1P12107 1806 aaPredicted RBP6.27□□□□□ -1.41
CHD2-224ENST00000636410 MGAMO43451 1857 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 ERICH2A1L162 156 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 PDHXO00330 501 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 WDR46O15213 610 aaKnown RBP6.26□□□□□ -1.41
CHD2-224ENST00000636410 CA12O43570 354 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 SEC24BO95487 1268 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 TOP1P11387 765 aaKnown RBP6.26□□□□□ -1.41
CHD2-224ENST00000636410 VCAM1P19320 739 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 MCM5P33992 734 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 ANTXR2P58335 489 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 SART3Q15020 963 aaKnown RBP6.26□□□□□ -1.41
CHD2-224ENST00000636410 ADCK5Q3MIX3 580 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 TREML2Q5T2D2 321 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 GPAT2Q6NUI2 795 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 DGKHQ86XP1 1220 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 LRRC47Q8N1G4 583 aaKnown RBP6.26□□□□□ -1.41
CHD2-224ENST00000636410 FAM43AQ8N2R8 423 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 ENAHQ8N8S7 591 aaPredicted RBP6.26□□□□□ -1.41
CHD2-224ENST00000636410 TTC14Q96N46 770 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 NEK1Q96PY6 1258 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 TMEM47Q9BQJ4 181 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 ZKSCAN3Q9BRR0 538 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 UBAC1Q9BSL1 405 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 BEGAINQ9BUH8 593 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 CFHR5Q9BXR6 569 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 EMILIN3Q9NT22 766 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 WBP1LQ9NX94 342 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 PNMA3Q9UL41 463 aa6.26□□□□□ -1.41
CHD2-224ENST00000636410 RBBP6Q7Z6E9 1792 aaKnown RBP6.26□□□□□ -1.41
CHD2-224ENST00000636410 WDR19Q8NEZ3 1342 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 ZSWIM8A7E2V4 1837 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L15C9J2P7 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L13C9JLJ4 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L11C9JVI0 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L18D6R9N7 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L22D6RA61 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L17D6RBQ6 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L19D6RCP7 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L20D6RJB6 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 F5H6K3 240 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 PRC1O43663 620 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 RAD21O60216 631 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 NDUFB10O96000 172 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 HMGB1P09429 215 aaKnown RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 OSBPP22059 807 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 PSMA5P28066 241 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 HOXA7P31268 230 aaPredicted RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 ANAPC15P60006 121 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 KLRC3Q07444 240 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 USP17L24Q0WX57 530 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 SEC23AQ15436 765 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 TAF1CQ15572 869 aaPredicted RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 KIAA1755Q5JYT7 1200 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 IFIT1BQ5T764 474 aaKnown RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 SLFN13Q68D06 897 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 CHST3Q7LGC8 479 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 SPICE1Q8N0Z3 855 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 PNMA1Q8ND90 353 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 ANKS1AQ92625 1134 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 IL17RAQ96F46 866 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 GMCL1Q96IK5 515 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 TMEM87BQ96K49 555 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 JAKMIP1Q96N16 626 aaKnown RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 PARK7Q99497 189 aaKnown RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 TANGO6Q9C0B7 1094 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 RPAP3Q9H6T3 665 aaPredicted RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 KAT14Q9H8E8 782 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 UPF2Q9HAU5 1272 aaKnown RBP6.25□□□□□ -1.41
CHD2-224ENST00000636410 ZFYVE28Q9HCC9 887 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 RNF186Q9NXI6 227 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 ADGRA2Q96PE1 1338 aa6.25□□□□□ -1.41
CHD2-224ENST00000636410 SH2B2O14492 632 aaPredicted RBP6.24□□□□□ -1.41
CHD2-224ENST00000636410 IFIT3O14879 490 aaKnown RBP6.24□□□□□ -1.41
CHD2-224ENST00000636410 TLR2O60603 784 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 TRPA1O75762 1119 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 HSPA1AP0DMV8 641 aaKnown RBP6.24□□□□□ -1.41
CHD2-224ENST00000636410 HSPA1BP0DMV9 641 aaKnown RBP6.24□□□□□ -1.41
CHD2-224ENST00000636410 SNHG28P0DPA3 235 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 CYP2C8P10632 490 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 BMP3P12645 472 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 CASTP20810 708 aaKnown RBP6.24□□□□□ -1.41
CHD2-224ENST00000636410 RPS6KB1P23443 525 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 SLC1A4P43007 532 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 IRX3P78415 501 aaPredicted RBP6.24□□□□□ -1.41
CHD2-224ENST00000636410 CRHR2Q13324 411 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 COL9A3Q14050 684 aaPredicted RBP6.24□□□□□ -1.41
CHD2-224ENST00000636410 WTAPQ15007 396 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 TMEM67Q5HYA8 995 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 FAM83BQ5T0W9 1011 aa6.24□□□□□ -1.41
CHD2-224ENST00000636410 BLOC1S2Q6QNY1 142 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms