RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 RPAP3Q9H6T3 665 aaPredicted RBP23.71■■□□□ 1.39
PNKP-219ENST00000626274 TACC3Q9Y6A5 838 aa23.71■■□□□ 1.39
PNKP-219ENST00000626274 TSPY2A6NKD2 308 aa23.7■■□□□ 1.38
PNKP-219ENST00000626274 PCP11498 1178 aaKnown RBP23.7■■□□□ 1.38
PNKP-219ENST00000626274 HERVK_113P62684 666 aa23.7■■□□□ 1.38
PNKP-219ENST00000626274 FAM110CQ1W6H9 321 aa23.7■■□□□ 1.38
PNKP-219ENST00000626274 FBXO46Q6PJ61 603 aaPredicted RBP23.7■■□□□ 1.38
PNKP-219ENST00000626274 GTF3C2Q8WUA4 911 aaPredicted RBP23.7■■□□□ 1.38
PNKP-219ENST00000626274 CEP95Q96GE4 821 aa23.7■■□□□ 1.38
PNKP-219ENST00000626274 GOPCQ9HD26 462 aa23.7■■□□□ 1.38
PNKP-219ENST00000626274 TOMM22Q9NS69 142 aa23.7■■□□□ 1.38
PNKP-219ENST00000626274 MTMR4Q9NYA4 1195 aa23.7■■□□□ 1.38
PNKP-219ENST00000626274 SGSM2O43147 1006 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 RANBP6O60518 1105 aaKnown RBP23.69■■□□□ 1.38
PNKP-219ENST00000626274 GNRH1P01148 92 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 PSMC4P43686 418 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 KIAA1755Q5JYT7 1200 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 AKNAD1Q5T1N1 836 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 MFSD6Q6ZSS7 791 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 ABHD8Q96I13 439 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 ARHGAP39Q9C0H5 1083 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 RNF41Q9H4P4 317 aaPredicted RBP23.69■■□□□ 1.38
PNKP-219ENST00000626274 CLIP2Q9UDT6 1046 aa23.69■■□□□ 1.38
PNKP-219ENST00000626274 DOCK3Q8IZD9 2030 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 ECM2O94769 699 aaPredicted RBP23.68■■□□□ 1.38
PNKP-219ENST00000626274 TTLL1O95922 423 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 IMMTQ16891 758 aaKnown RBP23.68■■□□□ 1.38
PNKP-219ENST00000626274 RRP12Q5JTH9 1297 aaKnown RBP23.68■■□□□ 1.38
PNKP-219ENST00000626274 PPP4R3BQ5MIZ7 849 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 SPICE1Q8N0Z3 855 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 STAG1Q8WVM7 1258 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 TANGO6Q9C0B7 1094 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 NBPF3Q9H094 633 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 MORF4L1Q9UBU8 362 aa23.68■■□□□ 1.38
PNKP-219ENST00000626274 WDR46O15213 610 aaKnown RBP23.67■■□□□ 1.38
PNKP-219ENST00000626274 FMNL1O95466 1100 aaPredicted RBP23.67■■□□□ 1.38
PNKP-219ENST00000626274 CTGFP29279 349 aa23.67■■□□□ 1.38
PNKP-219ENST00000626274 FCGRTP55899 365 aa23.67■■□□□ 1.38
PNKP-219ENST00000626274 TBC1D10CQ8IV04 446 aa23.67■■□□□ 1.38
PNKP-219ENST00000626274 MKL1Q969V6 931 aa23.67■■□□□ 1.38
PNKP-219ENST00000626274 SYNPO2Q9UMS6 1093 aa23.67■■□□□ 1.38
PNKP-219ENST00000626274 PTPN22Q9Y2R2 807 aa23.67■■□□□ 1.38
PNKP-219ENST00000626274 RLFQ13129 1914 aa23.67■■□□□ 1.38
PNKP-219ENST00000626274 RAD21O60216 631 aa23.66■■□□□ 1.38
PNKP-219ENST00000626274 HOXD10P28358 340 aa23.66■■□□□ 1.38
PNKP-219ENST00000626274 COG2Q14746 738 aa23.66■■□□□ 1.38
PNKP-219ENST00000626274 TRIM47Q96LD4 638 aa23.66■■□□□ 1.38
PNKP-219ENST00000626274 RBPJLQ9UBG7 517 aa23.66■■□□□ 1.38
PNKP-219ENST00000626274 PARP14Q460N5 1801 aa23.66■■□□□ 1.38
PNKP-219ENST00000626274 PTH1RQ03431 593 aa23.65■■□□□ 1.38
PNKP-219ENST00000626274 GPRC5AQ8NFJ5 357 aa23.65■■□□□ 1.38
PNKP-219ENST00000626274 HOXC10Q9NYD6 342 aa23.65■■□□□ 1.38
PNKP-219ENST00000626274 F5H6K3 240 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 NT5C2P49902 561 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 PRMT2P55345 433 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 KLRC3Q07444 240 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 LBX2Q6XYB7 198 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 ESYT1Q9BSJ8 1104 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 PAGR1Q9BTK6 254 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 TXNRD2Q9NNW7 524 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 IL17RBQ9NRM6 502 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 RABGAP1Q9Y3P9 1069 aa23.64■■□□□ 1.37
PNKP-219ENST00000626274 U3KPZ7 1027 aaPredicted RBP23.64■■□□□ 1.37
PNKP-219ENST00000626274 SPDYE16A6NNV3 312 aaPredicted RBP23.63■■□□□ 1.37
PNKP-219ENST00000626274 NMT2O60551 498 aa23.63■■□□□ 1.37
PNKP-219ENST00000626274 NDUFB10O96000 172 aa23.63■■□□□ 1.37
PNKP-219ENST00000626274 KIAA1211Q6ZU35 1233 aa23.63■■□□□ 1.37
PNKP-219ENST00000626274 LRRC47Q8N1G4 583 aaKnown RBP23.63■■□□□ 1.37
PNKP-219ENST00000626274 ESR2Q92731 530 aa23.63■■□□□ 1.37
PNKP-219ENST00000626274 STX8Q9UNK0 236 aa23.63■■□□□ 1.37
PNKP-219ENST00000626274 HPS5Q9UPZ3 1129 aa23.63■■□□□ 1.37
PNKP-219ENST00000626274 NEDD4P46934 1319 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 TNPO2O14787 897 aaKnown RBP23.62■■□□□ 1.37
PNKP-219ENST00000626274 FLOT1O75955 427 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 ERVK-9P63128 1117 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 ERVK-24P63145 666 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 FAM83BQ5T0W9 1011 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 POTEEQ6S8J3 1075 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 GMCL1P1Q8NEA9 526 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 TCP11L1Q9NUJ3 509 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 SRRDQ9UH36 339 aa23.62■■□□□ 1.37
PNKP-219ENST00000626274 MYPNQ86TC9 1320 aa23.61■■□□□ 1.37
PNKP-219ENST00000626274 PEX10O60683 326 aa23.61■■□□□ 1.37
PNKP-219ENST00000626274 CDC45O75419 566 aa23.61■■□□□ 1.37
PNKP-219ENST00000626274 DSG3P32926 999 aa23.61■■□□□ 1.37
PNKP-219ENST00000626274 CASC1Q6TDU7 716 aa23.61■■□□□ 1.37
PNKP-219ENST00000626274 MAP4K1Q92918 833 aa23.61■■□□□ 1.37
PNKP-219ENST00000626274 NOVP48745 357 aa23.6■■□□□ 1.37
PNKP-219ENST00000626274 Q3C1V9 767 aa23.6■■□□□ 1.37
PNKP-219ENST00000626274 IFFO2Q5TF58 517 aa23.6■■□□□ 1.37
PNKP-219ENST00000626274 COA7Q96BR5 231 aa23.6■■□□□ 1.37
PNKP-219ENST00000626274 NUP88Q99567 741 aaPredicted RBP23.6■■□□□ 1.37
PNKP-219ENST00000626274 CNNM2Q9H8M5 875 aa23.6■■□□□ 1.37
PNKP-219ENST00000626274 PTCH2Q9Y6C5 1203 aa23.6■■□□□ 1.37
PNKP-219ENST00000626274 A0A0G2JMZ2 1700 aa23.59■■□□□ 1.37
PNKP-219ENST00000626274 CNMDO75829 334 aa23.59■■□□□ 1.37
PNKP-219ENST00000626274 CCNA1P78396 465 aa23.59■■□□□ 1.37
PNKP-219ENST00000626274 SLFN13Q68D06 897 aa23.59■■□□□ 1.37
PNKP-219ENST00000626274 MB21D1Q8N884 522 aa23.59■■□□□ 1.37
PNKP-219ENST00000626274 KRT23Q9C075 422 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms