RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TNNI3KQ59H18 835 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 FKBP1CQ5VVH2 108 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 APOBEC3HQ6NTF7 200 aaKnown RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 CEP85Q6P2H3 762 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 ANKRD13AQ8IZ07 590 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 SPATA5Q8NB90 893 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 ZSCAN1Q8NBB4 408 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 ZIC5Q96T25 663 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 NOL10Q9BSC4 688 aaKnown RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 TSEN34Q9BSV6 310 aaKnown RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 TMEM39BQ9GZU3 492 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 USP40Q9NVE5 1235 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 RAI14Q9P0K7 980 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 LRP2BPQ9P2M1 347 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 NOP58Q9Y2X3 529 aaKnown RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 FPGT-TNNI3KV9GXZ4 949 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 PAPPA2Q9BXP8 1791 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 CEP350Q5VT06 3117 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 AOX1Q06278 1338 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 USP2O75604 605 aaPredicted RBP7.82□□□□□ -1.16
TCF4-249ENST00000625716 TRPA1O75762 1119 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 MAP3K11Q16584 847 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 LDLRAD1Q5T700 205 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 DCAF15Q66K64 600 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 CDC42EP5Q6NZY7 148 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 FAM83AQ86UY5 434 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 ADAM32Q8TC27 787 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 CSRNP1Q96S65 589 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 BCL11AQ9H165 835 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 RNF186Q9NXI6 227 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 SAGE1Q9NXZ1 904 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 HMG20BQ9P0W2 317 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 FZD1Q9UP38 647 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 DAGLAQ9Y4D2 1042 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 CSADQ9Y600 493 aa7.82□□□□□ -1.16
TCF4-249ENST00000625716 APBB1O00213 710 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 UPP2O95045 317 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 ARID4AP29374 1257 aaPredicted RBP7.81□□□□□ -1.16
TCF4-249ENST00000625716 RFC5P40937 340 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 INHBEP58166 350 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 TCP10Q12799 353 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 INTS6LQ5JSJ4 861 aaKnown RBP7.81□□□□□ -1.16
TCF4-249ENST00000625716 OTUD7BQ6GQQ9 843 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 ZBTB33Q86T24 672 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 ZSCAN29Q8IWY8 852 aaPredicted RBP7.81□□□□□ -1.16
TCF4-249ENST00000625716 FAM151AQ8WW52 585 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 DBNDD2Q9BQY9 259 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 CCDC8Q9H0W5 538 aaPredicted RBP7.81□□□□□ -1.16
TCF4-249ENST00000625716 SNRKQ9NRH2 765 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 ZBTB40Q9NUA8 1239 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 EXOC6BQ9Y2D4 811 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.81□□□□□ -1.16
TCF4-249ENST00000625716 ARAP2Q8WZ64 1704 aa7.81□□□□□ -1.16
TCF4-249ENST00000625716 MANSC4A6NHS7 340 aaPredicted RBP7.8□□□□□ -1.16
TCF4-249ENST00000625716 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 SPINT1O43278 529 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 RAB11FIP3O75154 756 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 IFIT2P09913 472 aaKnown RBP7.8□□□□□ -1.16
TCF4-249ENST00000625716 ZBTB48P10074 688 aaPredicted RBP7.8□□□□□ -1.16
TCF4-249ENST00000625716 MCAMP43121 646 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 BTDP43251 543 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 TM4SF4P48230 202 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 MECOMQ03112 1051 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 PTK2Q05397 1052 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 TBC1D9Q6ZT07 1266 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 AACSQ86V21 672 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 CLASRPQ8N2M8 674 aaKnown RBP7.8□□□□□ -1.16
TCF4-249ENST00000625716 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 KIF1BPQ96EK5 621 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 WNK4Q96J92 1243 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 CLMNQ96JQ2 1002 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 AGBL1Q96MI9 1066 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 TEPSINQ96N21 525 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 TRIM34Q9BYJ4 488 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 ZNF341Q9BYN7 854 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 ELP3Q9H9T3 547 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 GPSM3Q9Y4H4 160 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 THSD7BQ9C0I4 1608 aa7.8□□□□□ -1.16
TCF4-249ENST00000625716 MROH7-TTC4A0A0A0MT08 1334 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 TTLL8A6PVC2 850 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 IGSF3O75054 1194 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 ENTPD3O75355 529 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 BAG3O95817 575 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 MAP4K4O95819 1239 aaPredicted RBP7.79□□□□□ -1.16
TCF4-249ENST00000625716 PICALMQ13492 652 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 C20orf194Q5TEA3 1177 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 PI16Q6UXB8 463 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 MIGA2Q7L4E1 593 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 GPR161Q8N6U8 529 aaKnown RBP7.79□□□□□ -1.16
TCF4-249ENST00000625716 NSUN4Q96CB9 384 aaKnown RBP7.79□□□□□ -1.16
TCF4-249ENST00000625716 EAF2Q96CJ1 260 aaPredicted RBP7.79□□□□□ -1.16
TCF4-249ENST00000625716 OPTNQ96CV9 577 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 ZNF512BQ96KM6 892 aaPredicted RBP7.79□□□□□ -1.16
TCF4-249ENST00000625716 WRNIP1Q96S55 665 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 IL1RAPL2Q9NP60 686 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 TMPRSS4Q9NRS4 437 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
TCF4-249ENST00000625716 GAKO14976 1311 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 ECM29Q5VYK3 1845 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 GPR75-ASB3A0A0A6YYF3 556 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms