RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 ETV3P41162 512 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 CASP7P55210 303 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 NKG7Q16617 165 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 NBPF6Q5VWK0 638 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 PRAMEF13Q5VWM6 474 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 ATG4DQ86TL0 474 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-207ENST00000624700 CKAP2LQ8IYA6 745 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 PHACTR4Q8IZ21 702 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 FAM181AQ8N9Y4 354 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 CYB5D2Q8WUJ1 264 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 ANAPC16Q96DE5 110 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 NBPF4Q96M43 638 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 FBRSQ9HAH7 460 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 VAV3Q9UKW4 847 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 CEP131Q9UPN4 1083 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 CARMIL2Q6F5E8 1435 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 UPK3BL1B0FP48 263 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 UPK3BL2E5RIL1 263 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 CD8BP10966 210 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 GUCY2CP25092 1073 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 BBS9Q3SYG4 887 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 ARSHQ5FYA8 562 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-207ENST00000624700 GTF2IRD1Q9UHL9 959 aa6.5□□□□□ -1.37
CDKL5-207ENST00000624700 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-207ENST00000624700 PRKCQQ04759 706 aa6.49□□□□□ -1.37
CDKL5-207ENST00000624700 OVOS1Q6IE37 1185 aa6.49□□□□□ -1.37
CDKL5-207ENST00000624700 LETMD1Q6P1Q0 360 aa6.49□□□□□ -1.37
CDKL5-207ENST00000624700 CCDC81Q6ZN84 652 aa6.49□□□□□ -1.37
CDKL5-207ENST00000624700 LSRQ86X29 649 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-207ENST00000624700 RC3H2Q9HBD1 1191 aaKnown RBP6.49□□□□□ -1.37
CDKL5-207ENST00000624700 MKNK2Q9HBH9 465 aa6.49□□□□□ -1.37
CDKL5-207ENST00000624700 MBNL3Q9NUK0 354 aaKnown RBP6.49□□□□□ -1.37
CDKL5-207ENST00000624700 USP35Q9P2H5 1018 aa6.49□□□□□ -1.37
CDKL5-207ENST00000624700 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
CDKL5-207ENST00000624700 ETFBP38117 255 aa6.48□□□□□ -1.37
CDKL5-207ENST00000624700 IFI16Q16666 785 aaKnown RBP6.48□□□□□ -1.37
CDKL5-207ENST00000624700 DUSP23Q9BVJ7 150 aa6.48□□□□□ -1.37
CDKL5-207ENST00000624700 ZNF408Q9H9D4 720 aa6.48□□□□□ -1.37
CDKL5-207ENST00000624700 IGF2BP3O00425 579 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDKL5-207ENST00000624700 U2SURPO15042 1029 aaKnown RBP6.47□□□□□ -1.37
CDKL5-207ENST00000624700 RNF4P78317 190 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 PPP2R5EQ16537 467 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 FXNQ16595 210 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 ARHGAP27Q6ZUM4 889 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 PI4K2BQ8TCG2 481 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 SMARCC1Q92922 1105 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-207ENST00000624700 KIF2CQ99661 725 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 MIPEPQ99797 713 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 ANTXR1Q9H6X2 564 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 PHAXQ9H814 394 aaKnown RBP6.47□□□□□ -1.37
CDKL5-207ENST00000624700 ADAMTS6Q9UKP5 1117 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 MRVI1Q9Y6F6 885 aa6.47□□□□□ -1.37
CDKL5-207ENST00000624700 TMEM265A0A087WTH1 108 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 SMAD7O15105 426 aaKnown RBP6.46□□□□□ -1.38
CDKL5-207ENST00000624700 DNAJA2O60884 412 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 LEFTY1O75610 366 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 FARP2O94887 1054 aaPredicted RBP6.46□□□□□ -1.38
CDKL5-207ENST00000624700 SLITRK5O94991 958 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 KIR3DL1P43629 444 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 AOC3Q16853 763 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 ANKS3Q6ZW76 656 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 UBE3DQ7Z6J8 389 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 TTC6Q86TZ1 520 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 TOP6BLQ8N6T0 577 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 FAM168AQ92567 244 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 HRASLS5Q96KN8 279 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 SLC9A7Q96T83 725 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 TRIM55Q9BYV6 548 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 ACTR10Q9NZ32 417 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 SIRPGQ9P1W8 387 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 TPX2Q9ULW0 747 aaKnown RBP6.46□□□□□ -1.38
CDKL5-207ENST00000624700 MAPK8IP1Q9UQF2 711 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 U3KQE9 123 aa6.46□□□□□ -1.38
CDKL5-207ENST00000624700 A0A1W2PQH9 124 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 DBX1A6NMT0 343 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 CLEC3AO75596 197 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 CEACAM5P06731 702 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 CD96P40200 585 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 OXCT1P55809 520 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 NCAPHQ15003 741 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 ZNF124Q15973 351 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 UNC5AQ6ZN44 842 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 LRRN4CLQ8ND94 238 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 XAGE3Q8WTP9 111 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 DHX38Q92620 1227 aaKnown RBP6.45□□□□□ -1.38
CDKL5-207ENST00000624700 DPH2Q9BQC3 489 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-207ENST00000624700 ASPNQ9BXN1 380 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
CDKL5-207ENST00000624700 KCNH3Q9ULD8 1083 aa6.45□□□□□ -1.38
CDKL5-207ENST00000624700 RAB33AQ14088 237 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 PKN1Q16512 942 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 ANGEL2Q5VTE6 544 aaKnown RBP6.44□□□□□ -1.38
CDKL5-207ENST00000624700 C22orf34Q6ZV56 151 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 LRP10Q7Z4F1 713 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 CDH24Q86UP0 819 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 DNAJB8Q8NHS0 232 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 BAHD1Q8TBE0 780 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-207ENST00000624700 PPP1R13LQ8WUF5 828 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms