RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 AGMOQ6ZNB7 445 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 DTWD1Q8N5C7 304 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 BEND7Q8N7W2 519 aaPredicted RBP9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 TMEM74Q96NL1 305 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 ADAMTS1Q9UHI8 967 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 USP21Q9UK80 565 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 CAMTA1Q9Y6Y1 1673 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 KIAA0232Q92628 1395 aa9.35□□□□□ -0.91
RAB28P4-201ENST00000622233 LOC100289279A0A1B0GTE1 492 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 ZNF252P-AS1Q0IIN9 211 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 SEPT6Q14141 434 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 NUTM2GQ5VZR2 741 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 PODNQ7Z5L7 613 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 KCNB2Q92953 911 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 RHOVQ96L33 236 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 CCDC86Q9H6F5 360 aaKnown RBP9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 THSD7AQ9UPZ6 1657 aa9.34□□□□□ -0.91
RAB28P4-201ENST00000622233 FAM83GA6ND36 823 aa9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 GARTP22102 1010 aa9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 AP3B2Q13367 1082 aa9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 HDGFL2Q7Z4V5 671 aaPredicted RBP9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 UNC5CLQ8IV45 518 aa9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 MAP4K3Q8IVH8 894 aa9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 WDR89Q96FK6 387 aaPredicted RBP9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 CORO1BQ9BR76 489 aa9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
RAB28P4-201ENST00000622233 GCP02774 474 aa9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 CYP11A1P05108 521 aa9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 LIG1P18858 919 aa9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 RBM6P78332 1123 aaKnown RBP9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 DDX54Q8TDD1 881 aaKnown RBP9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 TGIF2Q9GZN2 237 aa9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 PRDM11Q9NQV5 511 aa9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 SAMM50Q9Y512 469 aa9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 COL5A2P05997 1499 aaPredicted RBP9.32□□□□□ -0.92
RAB28P4-201ENST00000622233 RXRBP28702 533 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 EIF4A3P38919 411 aaKnown RBP9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 CDK8P49336 464 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 VPS72Q15906 364 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 FBXL19Q6PCT2 694 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 BNC2Q6ZN30 1099 aaPredicted RBP9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 NME9Q86XW9 330 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 ZNF654Q8IZM8 581 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 AGGF1Q8N302 714 aaeCLIP9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 GAL3ST3Q96A11 431 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 CCSER2Q9H7U1 834 aa9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 FAM208AQ9UK61 1670 aaKnown RBP9.31□□□□□ -0.92
RAB28P4-201ENST00000622233 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 ZNF862O60290 1169 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 RLBP1P12271 317 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 ELNP15502 786 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 SELPP16109 830 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 ZC3H6P61129 1189 aaKnown RBP9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 RPS26P62854 115 aaKnown RBP9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 CHRNA2Q15822 529 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 DUOXA2Q1HG44 320 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 KIAA1211Q6ZU35 1233 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 GOLM1Q8NBJ4 401 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 FBXO27Q8NI29 283 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 GPBAR1Q8TDU6 330 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 ZNF296Q8WUU4 475 aaPredicted RBP9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 EMILIN2Q9BXX0 1053 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 BTG4Q9NY30 223 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 NOP53Q9NZM5 478 aaKnown RBP9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 CYP8B1Q9UNU6 501 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 PARP4Q9UKK3 1724 aaKnown RBP9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 NSD3Q9BZ95 1437 aa9.3□□□□□ -0.92
RAB28P4-201ENST00000622233 PEAK1Q9H792 1746 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 SPDYE3A6NKU9 549 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 ALX3O95076 343 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 LMNB2Q03252 620 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 PWP1Q13610 501 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 PRRT3Q5FWE3 981 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 SNAP47Q5SQN1 464 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 ARHGEF25Q86VW2 580 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 KCNH5Q8NCM2 988 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 SCARF2Q96GP6 870 aaPredicted RBP9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
RAB28P4-201ENST00000622233 MAP2P11137 1827 aaKnown RBP9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 LRRC37A3O60309 1634 aa9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 RGPD2P0DJD1 1756 aa9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 F13A1P00488 732 aa9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 PAK2Q13177 524 aa9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 LRRC14Q15048 493 aa9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 TRIM42Q8IWZ5 723 aa9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 MIR1-1HGQ9H1L0 117 aa9.28□□□□□ -0.92
RAB28P4-201ENST00000622233 CAPN10Q9HC96 672 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms