RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 COL9A3Q14050 684 aaPredicted RBP20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 GPAT2Q6NUI2 795 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 ZKSCAN3Q9BRR0 538 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 MTA3Q9BTC8 594 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 BACH2Q9BYV9 841 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 VCPKMTQ9H867 229 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 PTPRFP10586 1907 aa20.56■□□□□ 0.88
SLC6A6-209ENST00000622176 HMGB1P09429 215 aaKnown RBP20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 TOP1P11387 765 aaKnown RBP20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 CTCFP49711 727 aaPredicted RBP20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 MAP2K1Q02750 393 aaPredicted RBP20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 DGKZQ13574 1117 aa20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 SEC23AQ15436 765 aa20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 ANKRD23Q86SG2 305 aa20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 IFNL1Q8IU54 200 aa20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 ENAHQ8N8S7 591 aaPredicted RBP20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 LPAR1Q92633 364 aa20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 ZCCHC17Q9NP64 241 aaKnown RBP20.55■□□□□ 0.88
SLC6A6-209ENST00000622176 TNKSO95271 1327 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 WDR19Q8NEZ3 1342 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 IGF2BP3O00425 579 aaKnown RBP eCLIP20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 PRC1O43663 620 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 KIAA1755Q5JYT7 1200 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 GADL1Q6ZQY3 521 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 DHX32Q7L7V1 743 aaKnown RBP20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 CHST3Q7LGC8 479 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 LRRC47Q8N1G4 583 aaKnown RBP20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 GMCL1P1Q8NEA9 526 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 JAKMIP1Q96N16 626 aaKnown RBP20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 TM6SF1Q9BZW5 370 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 GOPCQ9HD26 462 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 AGTPBP1Q9UPW5 1226 aa20.54■□□□□ 0.88
SLC6A6-209ENST00000622176 F5H6K3 240 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 IFIT3O14879 490 aaKnown RBP20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 PSMA5P28066 241 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 KLRC3Q07444 240 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 SART3Q15020 963 aaKnown RBP20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 TREML2Q5T2D2 321 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 OTUD7BQ6GQQ9 843 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 FAM43AQ8N2R8 423 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 IGDCC4Q8TDY8 1250 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 TMEM87BQ96K49 555 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 SLC45A1Q9Y2W3 748 aa20.53■□□□□ 0.88
SLC6A6-209ENST00000622176 LOC285556D6RIA3 1793 aa20.52■□□□□ 0.88
SLC6A6-209ENST00000622176 NDUFB10O96000 172 aa20.52■□□□□ 0.88
SLC6A6-209ENST00000622176 VCAM1P19320 739 aa20.52■□□□□ 0.88
SLC6A6-209ENST00000622176 ZSWIM6Q9HCJ5 1215 aa20.52■□□□□ 0.88
SLC6A6-209ENST00000622176 PRDM10Q9NQV6 1147 aa20.52■□□□□ 0.88
SLC6A6-209ENST00000622176 ERICH2A1L162 156 aa20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 HOXA7P31268 230 aaPredicted RBP20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 TMEM67Q5HYA8 995 aa20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 BLOC1S2Q6QNY1 142 aa20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 SPICE1Q8N0Z3 855 aa20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 UPF2Q9HAU5 1272 aaKnown RBP20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
SLC6A6-209ENST00000622176 PDHXO00330 501 aa20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 SH2B2O14492 632 aaPredicted RBP20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 WDR46O15213 610 aaKnown RBP20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 CASTP20810 708 aaKnown RBP20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 RPS6KB1P23443 525 aa20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 RBM25P49756 843 aaKnown RBP20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 PABPC4Q13310 644 aaKnown RBP eCLIP20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 WTAPQ15007 396 aa20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 SLFN13Q68D06 897 aa20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 GMCL1Q96IK5 515 aa20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 C22orf23Q9BZE7 217 aa20.5■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L15C9J2P7 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L13C9JLJ4 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L11C9JVI0 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L18D6R9N7 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L22D6RA61 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L17D6RBQ6 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L19D6RCP7 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L20D6RJB6 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 HSPA8P11142 646 aaKnown RBP20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 CPA1P15085 419 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 LIFRP42702 1097 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 LBX1P52954 281 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 USP17L24Q0WX57 530 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 TMTC2Q8N394 836 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 PNMA1Q8ND90 353 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 RPAP3Q9H6T3 665 aaPredicted RBP20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 KAT14Q9H8E8 782 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 LY9Q9HBG7 655 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 SENP2Q9HC62 589 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 GPHNQ9NQX3 736 aaPredicted RBP20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 RNF186Q9NXI6 227 aa20.49■□□□□ 0.87
SLC6A6-209ENST00000622176 RAD21O60216 631 aa20.48■□□□□ 0.87
SLC6A6-209ENST00000622176 CATSPERGQ6ZRH7 1159 aa20.48■□□□□ 0.87
SLC6A6-209ENST00000622176 RUFY3Q7L099 469 aa20.48■□□□□ 0.87
SLC6A6-209ENST00000622176 FBXL16Q8N461 479 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms