RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 DZIP3Q86Y13 1208 aaKnown RBP17.85■□□□□ 0.45
NPHP4-211ENST00000622020 SPATA20Q8TB22 786 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 AK7Q96M32 723 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 ABCC12Q96J65 1359 aa17.85■□□□□ 0.45
NPHP4-211ENST00000622020 ALX1Q15699 326 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 ZNF579Q8NAF0 562 aaKnown RBP17.84■□□□□ 0.45
NPHP4-211ENST00000622020 STAG1Q8WVM7 1258 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 SOS2Q07890 1332 aaPredicted RBP17.84■□□□□ 0.45
NPHP4-211ENST00000622020 CTAGE15A4D2H0 777 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 CTAGE8P0CG41 777 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 RASGRP2Q7LDG7 609 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 CTAGE6Q86UF2 777 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 CTAGE4Q8IX94 777 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 CEP112Q8N8E3 955 aa17.84■□□□□ 0.45
NPHP4-211ENST00000622020 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
NPHP4-211ENST00000622020 UBXN1Q04323 297 aa17.83■□□□□ 0.45
NPHP4-211ENST00000622020 BRD3Q15059 726 aa17.83■□□□□ 0.45
NPHP4-211ENST00000622020 IFIT1BQ5T764 474 aaKnown RBP17.83■□□□□ 0.45
NPHP4-211ENST00000622020 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.451e-7■■■■■ 28.7
NPHP4-211ENST00000622020 FEZ2Q9UHY8 353 aaPredicted RBP17.83■□□□□ 0.45
NPHP4-211ENST00000622020 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 XBP1P17861 261 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 CDKAL1Q5VV42 579 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 HDXQ7Z353 690 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 NAPGQ99747 312 aaPredicted RBP17.83■□□□□ 0.44
NPHP4-211ENST00000622020 ABHD10Q9NUJ1 306 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 MST1RQ04912 1400 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 XDHP47989 1333 aa17.83■□□□□ 0.44
NPHP4-211ENST00000622020 TULP2O00295 520 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 FGFR2P21802 821 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 GYG1P46976 350 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 FAM47AQ5JRC9 791 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 TTC38Q5R3I4 469 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 CNGA4Q8IV77 575 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 IPO4Q8TEX9 1081 aaKnown RBP17.82■□□□□ 0.44
NPHP4-211ENST00000622020 ZNF512BQ96KM6 892 aaPredicted RBP17.82■□□□□ 0.44
NPHP4-211ENST00000622020 MAP2K7O14733 419 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 PBX1P40424 430 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 MTRQ99707 1265 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 JAG2Q9Y219 1238 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 TNS3Q68CZ2 1445 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 TNNT3P45378 269 aaPredicted RBP17.82■□□□□ 0.44
NPHP4-211ENST00000622020 SUSD4Q5VX71 490 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 RASGRP4Q8TDF6 673 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 NELFBQ8WX92 580 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 ESR2Q92731 530 aa17.82■□□□□ 0.44
NPHP4-211ENST00000622020 CASP8Q14790 479 aa17.81■□□□□ 0.44
NPHP4-211ENST00000622020 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-211ENST00000622020 GSPT2Q8IYD1 628 aaKnown RBP17.81■□□□□ 0.44
NPHP4-211ENST00000622020 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
NPHP4-211ENST00000622020 L1RE1Q9UN81 338 aa17.81■□□□□ 0.44
NPHP4-211ENST00000622020 MYH7P12883 1935 aa17.81■□□□□ 0.44
NPHP4-211ENST00000622020 LRRIQ3A6PVS8 624 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-211ENST00000622020 COPB1P53618 953 aaKnown RBP17.81■□□□□ 0.44
NPHP4-211ENST00000622020 FAM193AP78312 1265 aa17.81■□□□□ 0.44
NPHP4-211ENST00000622020 MRPS25P82663 173 aaKnown RBP17.81■□□□□ 0.44
NPHP4-211ENST00000622020 RIN2Q8WYP3 895 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-211ENST00000622020 GSDMAQ96QA5 445 aa17.81■□□□□ 0.44
NPHP4-211ENST00000622020 CDHR2Q9BYE9 1310 aa17.81■□□□□ 0.44
NPHP4-211ENST00000622020 ATRNO75882 1429 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 PP2D1A8MPX8 630 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 KCNJ18B7U540 433 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 ERLIN1O75477 346 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 NLRP5P59047 1200 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 KCNJ12Q14500 433 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 CATIPQ7Z7H3 387 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 PHF20Q9BVI0 1012 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 ARHGAP25P42331 645 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-211ENST00000622020 TMTC2Q8N394 836 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 ZSCAN10Q96SZ4 725 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-211ENST00000622020 NAA15Q9BXJ9 866 aaKnown RBP17.8■□□□□ 0.44
NPHP4-211ENST00000622020 RNF26Q9BY78 433 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-211ENST00000622020 COL18A1P39060 1754 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 LAMB4A4D0S4 1761 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 SEC23AQ15436 765 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 IL17AQ16552 155 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 HSP90B2PQ58FF3 399 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 CADPS2Q86UW7 1296 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 RNF41Q9H4P4 317 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-211ENST00000622020 MYO6Q9UM54 1294 aa17.8■□□□□ 0.44
NPHP4-211ENST00000622020 ALS2Q96Q42 1657 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 MROH5Q6ZUA9 1318 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 MYO1CO00159 1063 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 CYP19A1P11511 503 aaPredicted RBP17.79■□□□□ 0.44
NPHP4-211ENST00000622020 PAK1Q13153 545 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 LEKR1Q6ZMV7 388 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 CERS3Q8IU89 383 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 TTF2Q9UNY4 1162 aaKnown RBP17.79■□□□□ 0.44
NPHP4-211ENST00000622020 MYH8P13535 1937 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 TTC26A0AVF1 554 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 ERCC3P19447 782 aa17.79■□□□□ 0.44
NPHP4-211ENST00000622020 PRCPP42785 496 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms