RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SLC4A8Q2Y0W8 1093 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 CCDC148Q8NFR7 591 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 CRACR2AQ9BSW2 395 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 JADE2Q9NQC1 790 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 MYO6Q9UM54 1294 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 KIF13AQ9H1H9 1805 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 SYNRGQ9UMZ2 1314 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 NOP2P46087 812 aaKnown RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 CCT5P48643 541 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 ERVK-24P63145 666 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 MORC3Q14149 939 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 ARMT1Q9H993 441 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 FAM217BQ9NTX9 383 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 MACROD2A1Z1Q3 448 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 MFAP3LO75121 409 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 PTPREP23469 700 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 RDXP35241 583 aaKnown RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 PLCD1P51178 756 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 RBM5P52756 815 aaKnown RBP eCLIP7.83□□□□□ -1.161e-19■■■■■ 58.1
NEDD9-216ENST00000620854 UBXN1Q04323 297 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 TAX1BP1Q86VP1 789 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 ZNF219Q9P2Y4 722 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 FBXO2Q9UK22 296 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 THRAP3Q9Y2W1 955 aaKnown RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 SAMM50Q9Y512 469 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 CTDP1Q9Y5B0 961 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 LOC102724428A0A0B4J2F2 783 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 A0A1B0GTH6 734 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 USP5P45974 858 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 SIK1P57059 783 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 NTRK3Q16288 839 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 RTN1Q16799 776 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 ODF2Q5BJF6 829 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 CCDC122Q5T0U0 273 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 IGDCC4Q8TDY8 1250 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 ZNF622Q969S3 477 aaKnown RBP eCLIP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 MMS19Q96T76 1030 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 PIH1D3Q9NQM4 214 aaKnown RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 KIAA0754O94854 1291 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 ZFYP08048 801 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-216ENST00000620854 GGCXP38435 758 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 CYP27A1Q02318 531 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 DPYDQ12882 1025 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 EARS2Q5JPH6 523 aaKnown RBP7.82□□□□□ -1.16
NEDD9-216ENST00000620854 ICE2Q659A1 982 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 LRP10Q7Z4F1 713 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 DZIP1Q86YF9 867 aaKnown RBP7.82□□□□□ -1.16
NEDD9-216ENST00000620854 CERKQ8TCT0 537 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 AFAP1L1Q8TED9 768 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 LY9Q9HBG7 655 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 ADD3Q9UEY8 706 aaKnown RBP7.82□□□□□ -1.16
NEDD9-216ENST00000620854 DUSP10Q9Y6W6 482 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 PIK3C2AO00443 1686 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 UQCRFS1P1P0C7P4 283 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 PHKA1P46020 1223 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 TTF1Q15361 905 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-216ENST00000620854 SOGA3Q5TF21 947 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 SPATA1Q5VX52 437 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 MAGEB6Q8N7X4 407 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 PANX2Q96RD6 677 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 HEG1Q9ULI3 1381 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 FMN2Q9NZ56 1722 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 WNT7AO00755 349 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 MBD4O95243 580 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 MMP1P03956 469 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 ATP1A1P05023 1023 aaKnown RBP7.82□□□□□ -1.16
NEDD9-216ENST00000620854 SLC7A5Q01650 507 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 PPARAQ07869 468 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 KRT31Q15323 416 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 MFSD6Q6ZSS7 791 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 CNGA4Q8IV77 575 aa7.82□□□□□ -1.16
NEDD9-216ENST00000620854 V9GY48 417 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-216ENST00000620854 TRIM49BA6NDI0 452 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 GOLGA6L10A6NI86 522 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 ACTN4O43707 911 aaKnown RBP7.81□□□□□ -1.16
NEDD9-216ENST00000620854 CXCR5P32302 372 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 MAGEA9P43362 315 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 MNAT1P51948 309 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 TCIRG1Q13488 830 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 WTAPQ15007 396 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 RASGRP2Q7LDG7 609 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 PAGE5Q96GU1 130 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 PLCD4Q9BRC7 762 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 FAM107BQ9H098 131 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 SEPT11Q9NVA2 429 aaKnown RBP7.81□□□□□ -1.16
NEDD9-216ENST00000620854 CRYBG1Q9Y4K1 1723 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 CHD2O14647 1828 aaKnown RBP7.81□□□□□ -1.16
NEDD9-216ENST00000620854 TRIM75PA6NK02 468 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 APBA3O96018 575 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 MYBL2P10244 700 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 RILPL1Q5EBL4 403 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 FAM182BQ5T319 152 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 FAM71BQ8TC56 605 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 WASF1Q92558 559 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 SMARCAL1Q9NZC9 954 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 GDAQ9Y2T3 454 aa7.81□□□□□ -1.16
NEDD9-216ENST00000620854 EPN1Q9Y6I3 576 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms