RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 TOP1P11387 765 aaKnown RBP26.64■■□□□ 1.85
CBWD3-213ENST00000618217 GTF2A2P52657 109 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 SNAPC2Q13487 334 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 SART3Q15020 963 aaKnown RBP26.64■■□□□ 1.85
CBWD3-213ENST00000618217 TMEM67Q5HYA8 995 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 KIAA1755Q5JYT7 1200 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 PAXIP1Q6ZW49 1069 aaPredicted RBP26.64■■□□□ 1.85
CBWD3-213ENST00000618217 FBXL16Q8N461 479 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 ZIC5Q96T25 663 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 SH2D4AQ9H788 454 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 LY9Q9HBG7 655 aa26.64■■□□□ 1.85
CBWD3-213ENST00000618217 VEGFBP49765 207 aa26.63■■□□□ 1.85
CBWD3-213ENST00000618217 HMGCS2P54868 508 aa26.63■■□□□ 1.85
CBWD3-213ENST00000618217 DGKZQ13574 1117 aa26.63■■□□□ 1.85
CBWD3-213ENST00000618217 LRRC47Q8N1G4 583 aaKnown RBP26.63■■□□□ 1.85
CBWD3-213ENST00000618217 C12orf42Q96LP6 360 aa26.63■■□□□ 1.85
CBWD3-213ENST00000618217 TESPA1A2RU30 521 aaPredicted RBP26.62■■□□□ 1.85
CBWD3-213ENST00000618217 LIFRP42702 1097 aa26.62■■□□□ 1.85
CBWD3-213ENST00000618217 NOGQ13253 232 aa26.62■■□□□ 1.85
CBWD3-213ENST00000618217 USP17L2Q6R6M4 530 aa26.62■■□□□ 1.85
CBWD3-213ENST00000618217 FEZ1Q99689 392 aa26.62■■□□□ 1.85
CBWD3-213ENST00000618217 AGXT2Q9BYV1 514 aa26.62■■□□□ 1.85
CBWD3-213ENST00000618217 VCPKMTQ9H867 229 aa26.62■■□□□ 1.85
CBWD3-213ENST00000618217 WDR33Q9C0J8 1336 aaKnown RBP26.62■■□□□ 1.85
CBWD3-213ENST00000618217 USP14P54578 494 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 WTAPQ15007 396 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 IFIT1BQ5T764 474 aaKnown RBP26.61■■□□□ 1.85
CBWD3-213ENST00000618217 GMCL1P1Q8NEA9 526 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 BRI3BPQ8WY22 251 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 ERICH2A1L162 156 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 F5H6K3 240 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 AOC2O75106 756 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 CETPP11597 493 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 KLRC3Q07444 240 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 GRM1Q13255 1194 aa26.61■■□□□ 1.85
CBWD3-213ENST00000618217 ZYXQ15942 572 aaKnown RBP26.61■■□□□ 1.85
CBWD3-213ENST00000618217 MANSC4A6NHS7 340 aaPredicted RBP26.6■■□□□ 1.85
CBWD3-213ENST00000618217 SGMS1Q86VZ5 419 aa26.6■■□□□ 1.85
CBWD3-213ENST00000618217 TMTC2Q8N394 836 aa26.6■■□□□ 1.85
CBWD3-213ENST00000618217 PROCA1Q8NCQ7 364 aaPredicted RBP26.6■■□□□ 1.85
CBWD3-213ENST00000618217 KIF23Q02241 960 aaPredicted RBP26.59■■□□□ 1.85
CBWD3-213ENST00000618217 Q6ZUG5 572 aa26.59■■□□□ 1.85
CBWD3-213ENST00000618217 PNMA1Q8ND90 353 aa26.59■■□□□ 1.85
CBWD3-213ENST00000618217 ALDH8A1Q9H2A2 487 aaPredicted RBP26.59■■□□□ 1.85
CBWD3-213ENST00000618217 GOPCQ9HD26 462 aa26.59■■□□□ 1.85
CBWD3-213ENST00000618217 THSD7BQ9C0I4 1608 aa26.59■■□□□ 1.85
CBWD3-213ENST00000618217 CCL15-CCL14A0A0B4J2E2 113 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 NDUFB10O96000 172 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 CCL15Q16663 113 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 GPAT2Q6NUI2 795 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 FASTKD5Q7L8L6 764 aaKnown RBP26.58■■□□□ 1.85
CBWD3-213ENST00000618217 DNAJC5GQ8N7S2 189 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 LPAR1Q92633 364 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 PTPN18Q99952 460 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 KAT14Q9H8E8 782 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 PDRG1Q9NUG6 133 aa26.58■■□□□ 1.85
CBWD3-213ENST00000618217 TOB2Q14106 344 aaPredicted RBP26.57■■□□□ 1.84
CBWD3-213ENST00000618217 SPICE1Q8N0Z3 855 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 TMOD4Q9NZQ9 345 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 VCAM1P19320 739 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 MAP2K2P36507 400 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 TM4SF4P48230 202 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 NEK4P51957 841 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 INHBEP58166 350 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 TREML2Q5T2D2 321 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 SLFN13Q68D06 897 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 GMCL1Q96IK5 515 aa26.57■■□□□ 1.84
CBWD3-213ENST00000618217 SNHG28P0DPA3 235 aa26.56■■□□□ 1.84
CBWD3-213ENST00000618217 TROAPQ12815 778 aa26.56■■□□□ 1.84
CBWD3-213ENST00000618217 GADL1Q6ZQY3 521 aa26.56■■□□□ 1.84
CBWD3-213ENST00000618217 RASGRP2Q7LDG7 609 aa26.56■■□□□ 1.84
CBWD3-213ENST00000618217 BTBD19C9JJ37 291 aa26.55■■□□□ 1.84
CBWD3-213ENST00000618217 EVCP57679 992 aa26.55■■□□□ 1.84
CBWD3-213ENST00000618217 RABEP1Q15276 862 aa26.55■■□□□ 1.84
CBWD3-213ENST00000618217 BRF1Q92994 677 aa26.55■■□□□ 1.84
CBWD3-213ENST00000618217 BRPF3Q9ULD4 1205 aa26.55■■□□□ 1.84
CBWD3-213ENST00000618217 AGTPBP1Q9UPW5 1226 aa26.55■■□□□ 1.84
CBWD3-213ENST00000618217 CEP350Q5VT06 3117 aa26.55■■□□□ 1.84
CBWD3-213ENST00000618217 PDHBP11177 359 aa26.54■■□□□ 1.84
CBWD3-213ENST00000618217 RLFQ13129 1914 aa26.54■■□□□ 1.84
CBWD3-213ENST00000618217 IGF2BP3O00425 579 aaKnown RBP eCLIP26.54■■□□□ 1.84
CBWD3-213ENST00000618217 WDR46O15213 610 aaKnown RBP26.54■■□□□ 1.84
CBWD3-213ENST00000618217 HOXA7P31268 230 aaPredicted RBP26.54■■□□□ 1.84
CBWD3-213ENST00000618217 SREBF2Q12772 1141 aa26.54■■□□□ 1.84
CBWD3-213ENST00000618217 ANKRD23Q86SG2 305 aa26.54■■□□□ 1.84
CBWD3-213ENST00000618217 ZNF654Q8IZM8 581 aa26.54■■□□□ 1.84
CBWD3-213ENST00000618217 NUP88Q99567 741 aaPredicted RBP26.54■■□□□ 1.84
CBWD3-213ENST00000618217 TSHZ2Q9NRE2 1034 aa26.54■■□□□ 1.84
CBWD3-213ENST00000618217 PARP14Q460N5 1801 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 RAD21O60216 631 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 FGD1P98174 961 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 APOA5Q6Q788 366 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 NFXL1Q6ZNB6 911 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 IFNL1Q8IU54 200 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 REM2Q8IYK8 340 aaPredicted RBP26.53■■□□□ 1.84
CBWD3-213ENST00000618217 FAM43AQ8N2R8 423 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 DCAF4Q8WV16 495 aa26.53■■□□□ 1.84
CBWD3-213ENST00000618217 CCDC69A6NI79 296 aa26.52■■□□□ 1.84
CBWD3-213ENST00000618217 AK2P54819 239 aa26.52■■□□□ 1.84
CBWD3-213ENST00000618217 APOBRQ0VD83 1088 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms