RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RBBP5Q15291 538 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 FBXO38Q6PIJ6 1188 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 PPP1R21Q6ZMI0 780 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 GBP7Q8N8V2 638 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 PCDHA5Q9Y5H7 936 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 HOXC9P31274 260 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 ITIH3Q06033 890 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 DPH6Q7L8W6 267 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 RNF168Q8IYW5 571 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 SETDB2Q96T68 719 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 MPHOSPH6Q99547 160 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 PARD6BQ9BYG5 372 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 OSBPL3Q9H4L5 887 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 VPS54Q9P1Q0 977 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 LRRD1A4D1F6 860 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 PRDM1O75626 825 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 PNMA6AP0CW24 399 aaPredicted RBP11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 KCTD16Q68DU8 428 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 STAP2Q9UGK3 403 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 BCAP29Q9UHQ4 241 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 GUCY2DQ02846 1103 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 GCKRQ14397 625 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 FBXO18Q8NFZ0 1043 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 ODF2LQ9ULJ1 636 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 STK24Q9Y6E0 443 aa11.77□□□□□ -0.52
CLTCL1-209ENST00000617103 EPHB4P54760 987 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 NELFCDQ8IXH7 590 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 CASP14P31944 242 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 STAT1P42224 750 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 MAP3K21Q5TCX8 1036 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 CCDC197Q8NCU1 140 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 FAM89AQ96GI7 184 aa11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 LSG1Q9H089 658 aaKnown RBP11.77□□□□□ -0.53
CLTCL1-209ENST00000617103 PSMD6Q15008 389 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 VPS37BQ9H9H4 285 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 DPCR1Q3MIW9 517 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 RASIP1Q5U651 963 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 EDC3Q96F86 508 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 SUN1O94901 812 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 ITGA6P23229 1130 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 RFC4P35249 363 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 SMTNP53814 917 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 LSM14BQ9BX40 385 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 DPH5Q9H2P9 285 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 LARSQ9P2J5 1176 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 A2MP01023 1474 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 BUB1O43683 1085 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 NCBP1Q09161 790 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 TTC16Q8NEE8 873 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 U2AF1L4Q8WU68 220 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 IP6K1Q92551 441 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 MAP4K1Q92918 833 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 RILPQ96NA2 401 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 CLIC4Q9Y696 253 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
CLTCL1-209ENST00000617103 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 SLC39A14Q15043 492 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 CALCRLQ16602 461 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 EAF2Q96CJ1 260 aaPredicted RBP11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 LZTS2Q9BRK4 669 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 MYO1CO00159 1063 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 EXOC3O60645 756 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 TBC1D7Q9P0N9 293 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 RCOR1Q9UKL0 485 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 ZAP70P43403 619 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 TRPC3Q13507 836 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 ZNF654Q8IZM8 581 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 GSDMAQ96QA5 445 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 RPSAP08865 295 aaKnown RBP11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 SNX16P57768 344 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 ST5P78524 1137 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 INTS9Q9NV88 658 aaKnown RBP11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 EXOC7Q9UPT5 735 aa11.75□□□□□ -0.53
CLTCL1-209ENST00000617103 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms