RNA–Protein interactions for RNA: ENST00000616084.1

PCIF1-203, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 2

Gene PCIF1, Length 627 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-203ENST00000616084 USP17L13C9JLJ4 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 USP17L11C9JVI0 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 USP17L18D6R9N7 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 USP17L22D6RA61 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 USP17L17D6RBQ6 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 USP17L19D6RCP7 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 USP17L20D6RJB6 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 NMT2O60551 498 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 TLR2O60603 784 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 VCAM1P19320 739 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 USP17L24Q0WX57 530 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 SPICE1Q8N0Z3 855 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 LRRC47Q8N1G4 583 aaKnown RBP13.84□□□□□ -0.19
PCIF1-203ENST00000616084 LPAR1Q92633 364 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 ASCC2Q9H1I8 757 aaPredicted RBP13.84□□□□□ -0.19
PCIF1-203ENST00000616084 RPAP3Q9H6T3 665 aaPredicted RBP13.84□□□□□ -0.19
PCIF1-203ENST00000616084 PRDM10Q9NQV6 1147 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 CPA4Q9UI42 421 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 STX8Q9UNK0 236 aa13.84□□□□□ -0.19
PCIF1-203ENST00000616084 COL11A1P12107 1806 aaPredicted RBP13.84□□□□□ -0.19
PCIF1-203ENST00000616084 FKTNO75072 461 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 KDM4AO75164 1064 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 REC8O95072 547 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
PCIF1-203ENST00000616084 NT5C2P49902 561 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 RNF20Q5VTR2 975 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 RALYLQ86SE5 291 aaKnown RBP13.83□□□□□ -0.2
PCIF1-203ENST00000616084 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 ZNF296Q8WUU4 475 aaPredicted RBP13.83□□□□□ -0.2
PCIF1-203ENST00000616084 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 TANGO6Q9C0B7 1094 aa13.83□□□□□ -0.2
PCIF1-203ENST00000616084 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.2
PCIF1-203ENST00000616084 PCNTO95613 3336 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 RLFQ13129 1914 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 E7EWF7 191 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 F5H6K3 240 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 SLC27A2O14975 620 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 WDR46O15213 610 aaKnown RBP13.82□□□□□ -0.2
PCIF1-203ENST00000616084 SP3Q02447 781 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 KLRC3Q07444 240 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
PCIF1-203ENST00000616084 KIAA1755Q5JYT7 1200 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
PCIF1-203ENST00000616084 NCOA7Q8NI08 942 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 IL17RBQ9NRM6 502 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 TCP11L1Q9NUJ3 509 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 ZSWIM5Q9P217 1185 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 ZSWIM8A7E2V4 1837 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 MYH6P13533 1939 aa13.82□□□□□ -0.2
PCIF1-203ENST00000616084 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
PCIF1-203ENST00000616084 NDUFB10O96000 172 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
PCIF1-203ENST00000616084 NECTIN1Q15223 517 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 CCDC178Q5BJE1 867 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 SLFN13Q68D06 897 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 MKL1Q969V6 931 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 CHMP4CQ96CF2 233 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 ERO1AQ96HE7 468 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
PCIF1-203ENST00000616084 UBAC1Q9BSL1 405 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 TAF6LQ9Y6J9 622 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 ADGRA2Q96PE1 1338 aa13.81□□□□□ -0.2
PCIF1-203ENST00000616084 TOP1P11387 765 aaKnown RBP13.8□□□□□ -0.2
PCIF1-203ENST00000616084 HERVK_113P62684 666 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 KIF22Q14807 665 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 C17orf99Q6UX52 265 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 STOX1Q6ZVD7 989 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 ANKRD13CQ8N6S4 541 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 CD99L2Q8TCZ2 262 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 TTC14Q96N46 770 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 NUP88Q99567 741 aaPredicted RBP13.8□□□□□ -0.2
PCIF1-203ENST00000616084 SYNPO2Q9UMS6 1093 aa13.8□□□□□ -0.2
PCIF1-203ENST00000616084 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
PCIF1-203ENST00000616084 ERICH2A1L162 156 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 FLOT1O75955 427 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 BCRP11274 1271 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 ZKSCAN1P17029 563 aaPredicted RBP13.79□□□□□ -0.2
PCIF1-203ENST00000616084 COG2Q14746 738 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 CYB5R4Q7L1T6 521 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 GMCL1P1Q8NEA9 526 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
PCIF1-203ENST00000616084 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
PCIF1-203ENST00000616084 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 PAGR1Q9BTK6 254 aa13.79□□□□□ -0.2
PCIF1-203ENST00000616084 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
PCIF1-203ENST00000616084 BMP3P12645 472 aa13.78□□□□□ -0.2
PCIF1-203ENST00000616084 MCCP23508 829 aa13.78□□□□□ -0.2
PCIF1-203ENST00000616084 NOVP48745 357 aa13.78□□□□□ -0.2
PCIF1-203ENST00000616084 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
PCIF1-203ENST00000616084 SART3Q15020 963 aaKnown RBP13.78□□□□□ -0.2
PCIF1-203ENST00000616084 ARHGEF6Q15052 776 aa13.78□□□□□ -0.2
PCIF1-203ENST00000616084 CCDC96Q2M329 555 aa13.78□□□□□ -0.2
PCIF1-203ENST00000616084 DGKHQ86XP1 1220 aa13.78□□□□□ -0.2
PCIF1-203ENST00000616084 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
PCIF1-203ENST00000616084 FBXO28Q9NVF7 368 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms