RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SNX25Q9H3E2 840 aa13.91□□□□□ -0.18
TCF4-248ENST00000616053 FAM160B1Q5W0V3 765 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 RNF139Q8WU17 664 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 SH3KBP1Q96B97 665 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 MRPL44Q9H9J2 332 aaKnown RBP13.9□□□□□ -0.18
TCF4-248ENST00000616053 EXOC8Q8IYI6 725 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 ZNF212Q9UDV6 495 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 BRD3Q15059 726 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 HADHQ16836 314 aaKnown RBP13.9□□□□□ -0.18
TCF4-248ENST00000616053 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 IRAK1BP1Q5VVH5 260 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 GIMAP4Q9NUV9 329 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 ESPNB1AK53 854 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 ALAS1P13196 640 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 CC2D1AQ6P1N0 951 aaPredicted RBP13.9□□□□□ -0.18
TCF4-248ENST00000616053 MYO1AQ9UBC5 1043 aa13.9□□□□□ -0.18
TCF4-248ENST00000616053 KIF28PB7ZC32 967 aa13.9□□□□□ -0.19
TCF4-248ENST00000616053 TMEM191BP0C7N4 346 aa13.9□□□□□ -0.19
TCF4-248ENST00000616053 GARSP41250 739 aaKnown RBP13.89□□□□□ -0.19
TCF4-248ENST00000616053 ANKRD20A3Q5VUR7 823 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 ENOX1Q8TC92 643 aaKnown RBP13.89□□□□□ -0.19
TCF4-248ENST00000616053 UIMC1Q96RL1 719 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 EVI5O60447 810 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 GPC4O75487 556 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 ADALQ6DHV7 355 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 RSRC1Q96IZ7 334 aaKnown RBP13.89□□□□□ -0.19
TCF4-248ENST00000616053 USP21Q9UK80 565 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 SMCO2A6NFE2 343 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 CEBPAP49715 358 aaPredicted RBP13.89□□□□□ -0.19
TCF4-248ENST00000616053 HIF1AQ16665 826 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 TTC23LQ6PF05 361 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 LMNTD2Q8IXW0 634 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 MAN1C1Q9NR34 630 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 ARHGAP42A6NI28 874 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 SKOR1P84550 965 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 CADPSQ9ULU8 1353 aa13.89□□□□□ -0.19
TCF4-248ENST00000616053 MIER3Q7Z3K6 550 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 TTC31Q49AM3 519 aaPredicted RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 RINT1Q6NUQ1 792 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 RSBN1LQ6PCB5 846 aaPredicted RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 TMTC1Q8IUR5 882 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 PPP1R14AQ96A00 147 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 RMDN2Q96LZ7 410 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 ZHX1Q9UKY1 873 aaPredicted RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 LZTFL1Q9NQ48 299 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 PCDHB13Q9Y5F0 798 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 ZNF233A6NK53 670 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 POLGP54098 1239 aaPredicted RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 STX17P56962 302 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 ARFGAP3Q9NP61 516 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 HIBADHP31937 336 aaKnown RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 CHMP1BQ7LBR1 199 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 SELENONQ9NZV5 590 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 ZRANB2O95218 330 aaKnown RBP eCLIP13.88□□□□□ -0.19
TCF4-248ENST00000616053 APOEP02649 317 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 TFDP1Q14186 410 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 C2orf69Q8N8R5 385 aa13.88□□□□□ -0.19
TCF4-248ENST00000616053 C6orf203Q9P0P8 240 aaPredicted RBP13.88□□□□□ -0.19
TCF4-248ENST00000616053 IFNB1P01574 187 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 VCPP55072 806 aaKnown RBP13.87□□□□□ -0.19
TCF4-248ENST00000616053 ZC4H2Q9NQZ6 224 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 TPH2Q8IWU9 490 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
TCF4-248ENST00000616053 TBC1D12O60347 775 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 PMLP29590 882 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 HPDP32754 393 aaPredicted RBP13.87□□□□□ -0.19
TCF4-248ENST00000616053 TRIM31Q9BZY9 425 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 FBXL13Q8NEE6 735 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 ZFP42Q96MM3 310 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 EPAS1Q99814 870 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 METTL14Q9HCE5 456 aaKnown RBP13.87□□□□□ -0.19
TCF4-248ENST00000616053 GAS7O60861 476 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 KARSQ15046 597 aaKnown RBP13.87□□□□□ -0.19
TCF4-248ENST00000616053 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 EIF2AQ9BY44 585 aaKnown RBP13.87□□□□□ -0.19
TCF4-248ENST00000616053 RAB20Q9NX57 234 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 F13A1P00488 732 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
TCF4-248ENST00000616053 TTBK2Q6IQ55 1244 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
TCF4-248ENST00000616053 TCF3P15923 654 aa13.86□□□□□ -0.19
TCF4-248ENST00000616053 CIITAP33076 1130 aa13.86□□□□□ -0.19
TCF4-248ENST00000616053 STX1BP61266 288 aa13.86□□□□□ -0.19
TCF4-248ENST00000616053 C16orf62Q7Z3J2 963 aa13.86□□□□□ -0.19
TCF4-248ENST00000616053 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
TCF4-248ENST00000616053 HYOU1Q9Y4L1 999 aa13.86□□□□□ -0.19
TCF4-248ENST00000616053 MYO10Q9HD67 2058 aa13.86□□□□□ -0.19
TCF4-248ENST00000616053 TCP10L2B9ZVM9 353 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms