RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
COL4A1-205ENST00000615732 ZKSCAN1P17029 563 aaPredicted RBP12.72□□□□□ -0.37
COL4A1-205ENST00000615732 SYN1P17600 705 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 BMP8BP34820 402 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 NEK4P51957 841 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 PTH1RQ03431 593 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 MCMDC2Q4G0Z9 681 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 RNF20Q5VTR2 975 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
COL4A1-205ENST00000615732 IL17RAQ96F46 866 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
COL4A1-205ENST00000615732 NBPF3Q9H094 633 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 PORCNQ9H237 461 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 C11orf49Q9H6J7 331 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 CHMP5Q9NZZ3 219 aa12.72□□□□□ -0.37
COL4A1-205ENST00000615732 RBM8AQ9Y5S9 174 aaKnown RBP12.72□□□□□ -0.37
COL4A1-205ENST00000615732 PFASO15067 1338 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 RNF113AO15541 343 aaKnown RBP12.71□□□□□ -0.37
COL4A1-205ENST00000615732 ZFYP08048 801 aaPredicted RBP12.71□□□□□ -0.37
COL4A1-205ENST00000615732 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
COL4A1-205ENST00000615732 EVX2Q03828 476 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 TTF1Q15361 905 aaPredicted RBP12.71□□□□□ -0.37
COL4A1-205ENST00000615732 MAP3K21Q5TCX8 1036 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 FOXP4Q8IVH2 680 aaPredicted RBP12.71□□□□□ -0.37
COL4A1-205ENST00000615732 FEZ1Q99689 392 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL4A1-205ENST00000615732 HELLSQ9NRZ9 838 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 OGDHLQ9ULD0 1010 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 SNX14Q9Y5W7 946 aa12.71□□□□□ -0.37
COL4A1-205ENST00000615732 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
COL4A1-205ENST00000615732 MAGEA10P43363 369 aaPredicted RBP12.7□□□□□ -0.38
COL4A1-205ENST00000615732 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 ERVK-24P63145 666 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 ZSCAN25Q6NSZ9 544 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 Q7L0L9 218 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 RBPJLQ9UBG7 517 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
COL4A1-205ENST00000615732 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
COL4A1-205ENST00000615732 C19orf81C9J6K1 198 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 CCL14Q16627 93 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 Q3C1V9 767 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 ZMYM1Q5SVZ6 1142 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 CREB3L3Q68CJ9 461 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L2Q6R6M4 530 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 ZNF589Q86UQ0 364 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-205ENST00000615732 DEFB123Q8N688 67 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 ACER1Q8TDN7 264 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 SOCS4Q8WXH5 440 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 MAP4K1Q92918 833 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 NUDT12Q9BQG2 462 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
COL4A1-205ENST00000615732 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
COL4A1-205ENST00000615732 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-205ENST00000615732 XRCC5P13010 732 aaKnown RBP12.68□□□□□ -0.38
COL4A1-205ENST00000615732 PSMA5P28066 241 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 MAPK4P31152 587 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
COL4A1-205ENST00000615732 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 USP6NLQ92738 828 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 JAKMIP1Q96N16 626 aaKnown RBP12.68□□□□□ -0.38
COL4A1-205ENST00000615732 RIOK1Q9BRS2 568 aaKnown RBP12.68□□□□□ -0.38
COL4A1-205ENST00000615732 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
COL4A1-205ENST00000615732 MYH7P12883 1935 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 DNAH12Q6ZR08 3092 aa12.68□□□□□ -0.38
COL4A1-205ENST00000615732 LAMA2P24043 3122 aaKnown RBP12.67□□□□□ -0.38
COL4A1-205ENST00000615732 SLC27A2O14975 620 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 CNMDO75829 334 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 COL6A1P12109 1028 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 PDE6AP16499 860 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 VCAM1P19320 739 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
COL4A1-205ENST00000615732 CCND3P30281 292 aaPredicted RBP12.67□□□□□ -0.38
COL4A1-205ENST00000615732 SHMT1P34896 483 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 PLCD1P51178 756 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
COL4A1-205ENST00000615732 KRT32Q14532 448 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 ABCB5Q2M3G0 1257 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 TATDN1Q6P1N9 297 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 NOL8Q76FK4 1167 aaKnown RBP12.67□□□□□ -0.38
COL4A1-205ENST00000615732 PLEKHH3Q7Z736 793 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 KCNB2Q92953 911 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 APBA2Q99767 749 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 EHD4Q9H223 541 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 GINM1Q9NU53 330 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 NAV1Q8NEY1 1877 aa12.67□□□□□ -0.38
COL4A1-205ENST00000615732 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 POLR3DP05423 398 aaPredicted RBP12.66□□□□□ -0.38
COL4A1-205ENST00000615732 CYP2D6P10635 497 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms