RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 USPL1Q5W0Q7 1092 aa11.62□□□□□ -0.55
TNFAIP3-208ENST00000615468 PNMA8AQ86V59 439 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP3-208ENST00000615468 PCMTD1Q96MG8 357 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP3-208ENST00000615468 CCT8L2Q96SF2 557 aa11.62□□□□□ -0.55
TNFAIP3-208ENST00000615468 A6NNZ2 444 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 MYO1EQ12965 1108 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 TUBB8Q3ZCM7 444 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 CTAGE1Q96RT6 745 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 SH3GL3Q99963 347 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 GOLGA6L10A6NI86 522 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 BACH1O14867 736 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 SLC8A1P32418 973 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 RBBP5Q15291 538 aaKnown RBP11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 ZNF496Q96IT1 587 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 CHP1Q99653 195 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 A0A1B0GTH6 734 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 EZH2Q15910 746 aaKnown RBP11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 WASHC4Q2M389 1173 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 IFNL2Q8IZJ0 200 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 KRI1Q8N9T8 703 aaKnown RBP11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 SAAL1Q96ER3 474 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 MYD88Q99836 296 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 TAB2Q9NYJ8 693 aa11.61□□□□□ -0.55
TNFAIP3-208ENST00000615468 SYNRGQ9UMZ2 1314 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 CDC25CP30307 473 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 ERVK-24P63145 666 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 PPARAQ07869 468 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 TBC1D8BQ0IIM8 1120 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 NLRP14Q86W24 1093 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 SUCLG2Q96I99 432 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 EPN3Q9H201 632 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 DBF4Q9UBU7 674 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 EIF4E1BA6NMX2 242 aaKnown RBP11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 PRC1O43663 620 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 KRT86O43790 486 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 GYPCP04921 128 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 ZNF18P17022 549 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 PPP1R7Q15435 360 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 KRT40Q6A162 431 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 PHKBQ93100 1093 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 RPGRIP1Q96KN7 1286 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 CCDC43Q96MW1 224 aaKnown RBP11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 YIPF3Q9GZM5 350 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 TPX2Q9ULW0 747 aaKnown RBP11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 EME2A4GXA9 379 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 GUCY2FP51841 1108 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 TRAPPC11Q7Z392 1133 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 HDAC7Q8WUI4 952 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 LRRC1Q9BTT6 524 aa11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 DMGDHQ9UI17 866 aaKnown RBP11.6□□□□□ -0.55
TNFAIP3-208ENST00000615468 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 NDUFA10O95299 355 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 NR1D1P20393 614 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 CASP1P29466 404 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 PLCD1P51178 756 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 AMPD2Q01433 879 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 HIBCHQ6NVY1 386 aaPredicted RBP11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 NFXL1Q6ZNB6 911 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 CCDC82Q8N4S0 544 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 STAMQ92783 540 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 PPP1R37O75864 691 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 CLTAP09496 248 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 VAV2P52735 878 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 MRPL12P52815 198 aaKnown RBP11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 UBXN1Q04323 297 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 TTMPQ5BVD1 217 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 RESP18Q5W5W9 173 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 ZNF790Q6PG37 636 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 MICU3Q86XE3 530 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 PARD3BQ8TEW8 1205 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 CCDC51Q96ER9 411 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 SH3GL2Q99962 352 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 ABHD10Q9NUJ1 306 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 KCNB1Q14721 858 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 FUKQ8N0W3 1084 aa11.59□□□□□ -0.55
TNFAIP3-208ENST00000615468 AKAP12Q02952 1782 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 OPLAHO14841 1288 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 CYP27B1O15528 508 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 CXCR5P32302 372 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 SAFBQ15424 915 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 SPATA1Q5VX52 437 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 EHBP1Q8NDI1 1231 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 MYCBPAPQ8TBZ2 947 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZNF483Q8TF39 744 aaPredicted RBP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 GRM8O00222 908 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 EXOSC10Q01780 885 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 TFCP2Q12800 502 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 CPLX4Q7Z7G2 160 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 NUP133Q8WUM0 1156 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZNHIT6Q9NWK9 470 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms