RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 MTRF1LQ9UGC7 380 aaKnown RBP16.4■□□□□ 0.22
SNPH-203ENST00000614659 FRMD4BQ9Y2L6 1034 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 CAMSAP1Q5T5Y3 1602 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 PKP1Q13835 747 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 TRMT1LQ7Z2T5 733 aaKnown RBP16.4■□□□□ 0.22
SNPH-203ENST00000614659 DBNLQ9UJU6 430 aaKnown RBP16.4■□□□□ 0.22
SNPH-203ENST00000614659 PSDA5PKW4 1024 aaPredicted RBP16.4■□□□□ 0.22
SNPH-203ENST00000614659 TRAF5O00463 557 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 NELFBQ8WX92 580 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
SNPH-203ENST00000614659 SMTNP53814 917 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 SCRN1Q12765 414 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 MTX1Q13505 466 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 SECISBP2LQ93073 1101 aaKnown RBP16.39■□□□□ 0.21
SNPH-203ENST00000614659 VPS16Q9H269 839 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 MACROD2A1Z1Q3 448 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 HOXA7P31268 230 aaPredicted RBP16.39■□□□□ 0.21
SNPH-203ENST00000614659 USP14P54578 494 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 ZNF710Q8N1W2 664 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 VPS18Q9P253 973 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 MTUS1Q9ULD2 1270 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 LPXNO60711 386 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 CHRNDQ07001 517 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 TTLL7Q6ZT98 887 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 CROCCP2Q86T23 111 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 HACE1Q8IYU2 909 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 TGFBRAP1Q8WUH2 860 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 CAPZA3Q96KX2 299 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 NOX5Q96PH1 765 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 KDM3AQ9Y4C1 1321 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 ATP2A1O14983 1001 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 CETN3O15182 167 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 FBXO18Q8NFZ0 1043 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 SWAP70Q9UH65 585 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 PCDHA7Q9UN72 937 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
SNPH-203ENST00000614659 CRB1P82279 1406 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 RHOXF2BP0C7M4 288 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 C6orf163Q5TEZ5 329 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 RHOXF2Q9BQY4 288 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 OSBPP22059 807 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 DNM2P50570 870 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 WHAMMP3Q1A5X7 153 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 MICALL1Q8N3F8 863 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 ANKS4BQ8N8V4 417 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 IFT74Q96LB3 600 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 EXOC7Q9UPT5 735 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 FGAP02671 866 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 VPS72Q15906 364 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 ASIC2Q16515 512 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 CABP7Q86V35 215 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 MCF2L2Q86YR7 1114 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
SNPH-203ENST00000614659 LRWD1Q9UFC0 647 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 NDUFB9Q9Y6M9 179 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 INO80Q9ULG1 1556 aaPredicted RBP16.38■□□□□ 0.21
SNPH-203ENST00000614659 IKBKBO14920 756 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 GPR161Q8N6U8 529 aaKnown RBP16.38■□□□□ 0.21
SNPH-203ENST00000614659 EDC3Q96F86 508 aaKnown RBP16.38■□□□□ 0.21
SNPH-203ENST00000614659 FOXP1Q9H334 677 aaPredicted RBP16.38■□□□□ 0.21
SNPH-203ENST00000614659 ARHGEF40Q8TER5 1519 aa16.38■□□□□ 0.21
SNPH-203ENST00000614659 EBAG9O00559 213 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 ARID4AP29374 1257 aaPredicted RBP16.37■□□□□ 0.21
SNPH-203ENST00000614659 TRAPPC10P48553 1259 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 TAF12Q16514 161 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 SLC9C1Q4G0N8 1177 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 CLEC17AQ6ZS10 378 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 CEP63Q96MT8 703 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 PNOCQ13519 176 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 BRD3Q15059 726 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 SYNCQ9H7C4 482 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 PLEKHG2Q9H7P9 1386 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 MYO3BQ8WXR4 1341 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
SNPH-203ENST00000614659 TCP10Q12799 353 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 LRRC8AQ8IWT6 810 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 KCNJ14Q9UNX9 436 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 IKBKGQ9Y6K9 419 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
SNPH-203ENST00000614659 SLC39A14Q15043 492 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 NSUN7Q8NE18 718 aaKnown RBP16.37■□□□□ 0.21
SNPH-203ENST00000614659 MYL10Q9BUA6 226 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 CARD6Q9BX69 1037 aa16.37■□□□□ 0.21
SNPH-203ENST00000614659 GTPBP6O43824 516 aaPredicted RBP16.36■□□□□ 0.21
SNPH-203ENST00000614659 ADCK5Q3MIX3 580 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms