RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 GOLGA8BA8MQT2 603 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 UBE2Q2LH0YL09 131 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 CELF2O95319 508 aaKnown RBP18.2■□□□□ 0.5
CCL3-206ENST00000614051 TOP1P11387 765 aaKnown RBP18.2■□□□□ 0.5
CCL3-206ENST00000614051 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
CCL3-206ENST00000614051 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
CCL3-206ENST00000614051 VGLL4Q14135 290 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 PNMA1Q8ND90 353 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 ACER1Q8TDN7 264 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 CLMNQ96JQ2 1002 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 NYAP2Q9P242 653 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 SLC12A7Q9Y666 1083 aa18.2■□□□□ 0.5
CCL3-206ENST00000614051 A0A1W2PRG0 241 aa18.19■□□□□ 0.5
CCL3-206ENST00000614051 ECE1P42892 770 aa18.19■□□□□ 0.5
CCL3-206ENST00000614051 ST3GAL1Q11201 340 aa18.19■□□□□ 0.5
CCL3-206ENST00000614051 BECN1Q14457 450 aa18.19■□□□□ 0.5
CCL3-206ENST00000614051 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
CCL3-206ENST00000614051 NUP133Q8WUM0 1156 aa18.19■□□□□ 0.5
CCL3-206ENST00000614051 ZNF274Q96GC6 653 aaPredicted RBP18.19■□□□□ 0.5
CCL3-206ENST00000614051 ZSCAN31Q96LW9 406 aaPredicted RBP18.19■□□□□ 0.5
CCL3-206ENST00000614051 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
CCL3-206ENST00000614051 SNCAIPQ9Y6H5 919 aa18.19■□□□□ 0.5
CCL3-206ENST00000614051 ZBTB43O43298 467 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 PTPRAP18433 802 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 NOL9Q5SY16 702 aaKnown RBP18.18■□□□□ 0.5
CCL3-206ENST00000614051 CST9Q5W186 159 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 ARMC9Q7Z3E5 817 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 CATIPQ7Z7H3 387 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 CCDC83Q8IWF9 413 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 SPRYD3Q8NCJ5 442 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 SLKQ9H2G2 1235 aaPredicted RBP18.18■□□□□ 0.5
CCL3-206ENST00000614051 PICK1Q9NRD5 415 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 CREBZFQ9NS37 354 aa18.18■□□□□ 0.5
CCL3-206ENST00000614051 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 PFKFB2O60825 505 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 SCRN1Q12765 414 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 TROAPQ12815 778 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 MAP3K11Q16584 847 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 SYNE3Q6ZMZ3 975 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 MKL1Q969V6 931 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 ELP3Q9H9T3 547 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 GBA2Q9HCG7 927 aaPredicted RBP18.17■□□□□ 0.5
CCL3-206ENST00000614051 GINM1Q9NU53 330 aa18.17■□□□□ 0.5
CCL3-206ENST00000614051 GOLGA8AA7E2F4 631 aa18.16■□□□□ 0.5
CCL3-206ENST00000614051 RAD21O60216 631 aa18.16■□□□□ 0.5
CCL3-206ENST00000614051 ZYXQ15942 572 aaKnown RBP18.16■□□□□ 0.5
CCL3-206ENST00000614051 ANKRD13AQ8IZ07 590 aa18.16■□□□□ 0.5
CCL3-206ENST00000614051 SH2B1Q9NRF2 756 aaPredicted RBP18.16■□□□□ 0.5
CCL3-206ENST00000614051 CSADQ9Y600 493 aa18.16■□□□□ 0.5
CCL3-206ENST00000614051 DDAH1O94760 285 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 CDC27P30260 824 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 METAP2P50579 478 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCL3-206ENST00000614051 KIAA1755Q5JYT7 1200 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 LDLRAD1Q5T700 205 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 FAM217BQ9NTX9 383 aaPredicted RBP18.15■□□□□ 0.5
CCL3-206ENST00000614051 ZHX2Q9Y6X8 837 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 PASKQ96RG2 1323 aa18.15■□□□□ 0.5
CCL3-206ENST00000614051 PPFIA3O75145 1194 aa18.14■□□□□ 0.5
CCL3-206ENST00000614051 ADD1P35611 737 aaKnown RBP18.14■□□□□ 0.5
CCL3-206ENST00000614051 SPP2Q13103 211 aa18.14■□□□□ 0.5
CCL3-206ENST00000614051 DGKZQ13574 1117 aa18.14■□□□□ 0.5
CCL3-206ENST00000614051 CUL4AQ13619 759 aa18.14■□□□□ 0.5
CCL3-206ENST00000614051 C2orf69Q8N8R5 385 aa18.14■□□□□ 0.5
CCL3-206ENST00000614051 FANCBQ8NB91 859 aa18.14■□□□□ 0.5
CCL3-206ENST00000614051 IPO9Q96P70 1041 aaKnown RBP18.14■□□□□ 0.5
CCL3-206ENST00000614051 TMX2Q9Y320 296 aa18.14■□□□□ 0.5
CCL3-206ENST00000614051 GOLGA8HP0CJ92 632 aa18.14■□□□□ 0.49
CCL3-206ENST00000614051 RTN1Q16799 776 aa18.14■□□□□ 0.49
CCL3-206ENST00000614051 USP17L2Q6R6M4 530 aa18.14■□□□□ 0.49
CCL3-206ENST00000614051 CMTR1Q8N1G2 835 aaKnown RBP18.14■□□□□ 0.49
CCL3-206ENST00000614051 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 F5H6K3 240 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 CTDNEP1O95476 244 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 CALM1P0DP23 149 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 CALM2P0DP24 149 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 CALM3P0DP25 149 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 PDHBP11177 359 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 KLRC3Q07444 240 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 GRM4Q14833 912 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 SLFN13Q68D06 897 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 SPICE1Q8N0Z3 855 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 NUP88Q99567 741 aaPredicted RBP18.13■□□□□ 0.49
CCL3-206ENST00000614051 FEZ1Q99689 392 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 WDR18Q9BV38 432 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 MAD2L2Q9UI95 211 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 PTPRFP10586 1907 aa18.13■□□□□ 0.49
CCL3-206ENST00000614051 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
CCL3-206ENST00000614051 NID2Q14112 1375 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 PLEKHA8P1O95397 391 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 NDUFB10O96000 172 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 FKBP1BP68106 108 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 MTMR2Q13614 643 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 ZNF280CQ8ND82 737 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 AS3MTQ9HBK9 375 aa18.12■□□□□ 0.49
CCL3-206ENST00000614051 AFG3L2Q9Y4W6 797 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms