RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 CFHR5Q9BXR6 569 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 VCPKMTQ9H867 229 aa15.62■□□□□ 0.09
MDC1-209ENST00000613547 MYH8P13535 1937 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 ERICH2A1L162 156 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L15C9J2P7 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L13C9JLJ4 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L11C9JVI0 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L18D6R9N7 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L22D6RA61 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L17D6RBQ6 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L19D6RCP7 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L20D6RJB6 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 NMT2O60551 498 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 TOP1P11387 765 aaKnown RBP15.61■□□□□ 0.09
MDC1-209ENST00000613547 CTCFP49711 727 aaPredicted RBP15.61■□□□□ 0.09
MDC1-209ENST00000613547 USP17L24Q0WX57 530 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 DGKZQ13574 1117 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 SMCR8Q8TEV9 937 aaPredicted RBP15.61■□□□□ 0.09
MDC1-209ENST00000613547 ZSCAN10Q96SZ4 725 aaPredicted RBP15.61■□□□□ 0.09
MDC1-209ENST00000613547 IL17RBQ9NRM6 502 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 ZSWIM5Q9P217 1185 aa15.61■□□□□ 0.09
MDC1-209ENST00000613547 WDR46O15213 610 aaKnown RBP15.6■□□□□ 0.09
MDC1-209ENST00000613547 TBC1D8O95759 1140 aa15.6■□□□□ 0.09
MDC1-209ENST00000613547 HOXA7P31268 230 aaPredicted RBP15.6■□□□□ 0.09
MDC1-209ENST00000613547 HSPA4P34932 840 aa15.6■□□□□ 0.09
MDC1-209ENST00000613547 CRHR2Q13324 411 aa15.6■□□□□ 0.09
MDC1-209ENST00000613547 DGKHQ86XP1 1220 aa15.6■□□□□ 0.09
MDC1-209ENST00000613547 SPICE1Q8N0Z3 855 aa15.6■□□□□ 0.09
MDC1-209ENST00000613547 LRRC47Q8N1G4 583 aaKnown RBP15.6■□□□□ 0.09
MDC1-209ENST00000613547 GMCL1P1Q8NEA9 526 aa15.6■□□□□ 0.09
MDC1-209ENST00000613547 TANGO6Q9C0B7 1094 aa15.6■□□□□ 0.09
MDC1-209ENST00000613547 RPAP3Q9H6T3 665 aaPredicted RBP15.6■□□□□ 0.09
MDC1-209ENST00000613547 PHIPQ8WWQ0 1821 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 F5H6K3 240 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 FOXN1O15353 648 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 CYP2C8P10632 490 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 KLRC3Q07444 240 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 TSGA10IPQ3SY00 556 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 STOX1Q6ZVD7 989 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 ZKSCAN3Q9BRR0 538 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 ASCC2Q9H1I8 757 aaPredicted RBP15.59■□□□□ 0.09
MDC1-209ENST00000613547 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 TAF6LQ9Y6J9 622 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 TNKSO95271 1327 aa15.59■□□□□ 0.09
MDC1-209ENST00000613547 IFIT3O14879 490 aaKnown RBP15.58■□□□□ 0.08
MDC1-209ENST00000613547 TLR2O60603 784 aa15.58■□□□□ 0.08
MDC1-209ENST00000613547 HMGB1P09429 215 aaKnown RBP15.58■□□□□ 0.08
MDC1-209ENST00000613547 MCM5P33992 734 aa15.58■□□□□ 0.08
MDC1-209ENST00000613547 NOVP48745 357 aa15.58■□□□□ 0.08
MDC1-209ENST00000613547 GTF3C2Q8WUA4 911 aaPredicted RBP15.58■□□□□ 0.08
MDC1-209ENST00000613547 NEK1Q96PY6 1258 aa15.58■□□□□ 0.08
MDC1-209ENST00000613547 USP26Q9BXU7 913 aa15.58■□□□□ 0.08
MDC1-209ENST00000613547 TSKSQ9UJT2 592 aa15.58■□□□□ 0.08
MDC1-209ENST00000613547 ISY1Q9ULR0 285 aaKnown RBP15.58■□□□□ 0.08
MDC1-209ENST00000613547 GREB1LQ9C091 1923 aaPredicted RBP15.58■□□□□ 0.08
MDC1-209ENST00000613547 NDUFB10O96000 172 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 PSMA5P28066 241 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 GCLCP48506 637 aaPredicted RBP15.57■□□□□ 0.08
MDC1-209ENST00000613547 NOM1Q5C9Z4 860 aaKnown RBP15.57■□□□□ 0.08
MDC1-209ENST00000613547 IFIT1BQ5T764 474 aaKnown RBP15.57■□□□□ 0.08
MDC1-209ENST00000613547 SLFN13Q68D06 897 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 CATSPERGQ6ZRH7 1159 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 CYB5R4Q7L1T6 521 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 MB21D2Q8IYB1 491 aaPredicted RBP15.57■□□□□ 0.08
MDC1-209ENST00000613547 ENAHQ8N8S7 591 aaPredicted RBP15.57■□□□□ 0.08
MDC1-209ENST00000613547 GMCL1Q96IK5 515 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 TMEM47Q9BQJ4 181 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 MTA3Q9BTC8 594 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 HOXC10Q9NYD6 342 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 LOC285556D6RIA3 1793 aa15.57■□□□□ 0.08
MDC1-209ENST00000613547 GPR25O00155 361 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 PRC1O43663 620 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 FLOT1O75955 427 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 HSPA8P11142 646 aaKnown RBP15.56■□□□□ 0.08
MDC1-209ENST00000613547 SLC1A4P43007 532 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 HERVK_113P62684 666 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 COG2Q14746 738 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 TMEM67Q5HYA8 995 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 FAM83BQ5T0W9 1011 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 RCSD1Q6JBY9 416 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 ANKS1AQ92625 1134 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 KCNB2Q92953 911 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
MDC1-209ENST00000613547 MYPNQ86TC9 1320 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 FKTNO75072 461 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 BMP3P12645 472 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 WTAPQ15007 396 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 CCDC96Q2M329 555 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 KIAA1755Q5JYT7 1200 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 CHST3Q7LGC8 479 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 TMTC2Q8N394 836 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 PNMA1Q8ND90 353 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 NKX2-3Q8TAU0 364 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 DCAF4Q8WV16 495 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 TMEM87BQ96K49 555 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 JAKMIP1Q96N16 626 aaKnown RBP15.55■□□□□ 0.08
MDC1-209ENST00000613547 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
MDC1-209ENST00000613547 CPA4Q9UI42 421 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms