RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PALM3A6NDB9 673 aaPredicted RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 APOA1P02647 267 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 VPS41P49754 854 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 TBC1D22AQ8WUA7 517 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 XPO4Q9C0E2 1151 aaKnown RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 BICC1Q9H694 974 aaKnown RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 SEPT10Q9P0V9 454 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 UBE4BO95155 1302 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 KRT75O95678 551 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 PLCB3Q01970 1234 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 ASPHQ12797 758 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 RILPQ96NA2 401 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 CRACR2BQ8N4Y2 399 aaPredicted RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 VTI1AQ96AJ9 217 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 KRT9P35527 623 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 CASP8Q14790 479 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 LRGUKQ96M69 825 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 RTEL1-TNFRSF6BF6WH68 1400 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 DNM2P50570 870 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 SULT6B1Q6IMI4 303 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 SMARCA5O60264 1052 aaPredicted RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 CTNND1O60716 968 aaKnown RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 PLEKHM2Q8IWE5 1019 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 FAM186BQ8IYM0 893 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 ZKSCAN3Q9BRR0 538 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 RPSAP08865 295 aaKnown RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 FLIIQ13045 1269 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 RAPGEF1Q13905 1077 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 ADALQ6DHV7 355 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 SNX29Q8TEQ0 813 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 TMEM63CQ9P1W3 806 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 NOC2LQ9Y3T9 749 aaKnown RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 MCF2P10911 925 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 PYGBP11216 843 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 KRT4P19013 534 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 CCND1P24385 295 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 YY1P25490 414 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 INAQ16352 499 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 MYH11P35749 1972 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 ATP1A2P50993 1020 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 AP2B1P63010 937 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 SRRM1Q8IYB3 904 aaKnown RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 BAG2O95816 211 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 FAM133BQ5BKY9 247 aaKnown RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 TSC22D4Q9Y3Q8 395 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 BTBD11A6QL63 1104 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 KRIT1O00522 736 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 FOXP2O15409 715 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 CCDC184Q52MB2 194 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 CREB3L3Q68CJ9 461 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 SCYL3Q8IZE3 742 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 MYL1P05976 194 aa9.63□□□□□ -0.87
TTC28-208ENST00000612946 C17orf53Q8N3J3 647 aaPredicted RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 THOC1Q96FV9 657 aaKnown RBP9.63□□□□□ -0.87
TTC28-208ENST00000612946 PTPDC1A2A3K4 754 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 KDM1AO60341 852 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 CABP2Q9NPB3 220 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 CCDC159P0C7I6 412 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 BCRP11274 1271 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 MCM7P33993 719 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 ZBTB40Q9NUA8 1239 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 SLC52A1Q9NWF4 448 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 KLC1Q07866 573 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 SARM1Q6SZW1 724 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 LCA5Q86VQ0 697 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 GRAMD1AQ96CP6 724 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 PBKQ96KB5 322 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 OSBPL1AQ9BXW6 950 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 KAT14Q9H8E8 782 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 MTX1Q13505 466 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 KRT79Q5XKE5 535 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 LRRC8BQ6P9F7 803 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 ZGPATQ8N5A5 531 aaKnown RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 BPIFA3Q9BQP9 254 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 BSDC1Q9NW68 430 aaPredicted RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 DEAF1O75398 565 aaPredicted RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 HSPA9P38646 679 aaKnown RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 CCT6AP40227 531 aaKnown RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 COL17A1Q9UMD9 1497 aaPredicted RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 UQCRFS1P1P0C7P4 283 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 LAMB3Q13751 1172 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 CAVIN4Q5BKX8 364 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 DTHD1Q6ZMT9 781 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 NNTQ13423 1086 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 E2F5Q15329 346 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 PRPF31Q8WWY3 499 aaKnown RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 GIMAP4Q9NUV9 329 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 UHRF1BP1LA0JNW5 1464 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 SYNMO15061 1565 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 GUCY1B3Q02153 619 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 KPNB1Q14974 876 aaKnown RBP9.62□□□□□ -0.87
TTC28-208ENST00000612946 TRIM55Q9BYV6 548 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms