RNA–Protein interactions for RNA: ENST00000611889.1

LINC01879-201, Transcript of long intergenic non-protein coding RNA 1879, humanhuman

TSL 2 BASIC

Gene LINC01879, Length 2,338 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01879-201ENST00000611889 SMC1BQ8NDV3 1235 aa13.22□□□□□ -0.29
LINC01879-201ENST00000611889 GMCL1P1Q8NEA9 526 aa13.22□□□□□ -0.29
LINC01879-201ENST00000611889 WRNIP1Q96S55 665 aa13.22□□□□□ -0.29
LINC01879-201ENST00000611889 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
LINC01879-201ENST00000611889 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
LINC01879-201ENST00000611889 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
LINC01879-201ENST00000611889 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
LINC01879-201ENST00000611889 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
LINC01879-201ENST00000611889 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
LINC01879-201ENST00000611889 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
LINC01879-201ENST00000611889 PICK1Q9NRD5 415 aa13.21□□□□□ -0.29
LINC01879-201ENST00000611889 OTOFQ9HC10 1997 aa13.21□□□□□ -0.29
LINC01879-201ENST00000611889 SMARCA1P28370 1054 aa13.21□□□□□ -0.3
LINC01879-201ENST00000611889 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.3
LINC01879-201ENST00000611889 ST3GAL1Q11201 340 aa13.21□□□□□ -0.3
LINC01879-201ENST00000611889 GRM4Q14833 912 aa13.21□□□□□ -0.3
LINC01879-201ENST00000611889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC01879-201ENST00000611889 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.3
LINC01879-201ENST00000611889 AS3MTQ9HBK9 375 aa13.21□□□□□ -0.3
LINC01879-201ENST00000611889 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.3
LINC01879-201ENST00000611889 MYH6P13533 1939 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 IFNAR1P17181 557 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 PDCP20941 246 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 FKBP1BP68106 108 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 ASPRV1Q53RT3 343 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 PRAMEF18Q5VWM3 479 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 SMARCC2Q8TAQ2 1214 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 MYL10Q9BUA6 226 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
LINC01879-201ENST00000611889 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
LINC01879-201ENST00000611889 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 USP2O75604 605 aaPredicted RBP13.19□□□□□ -0.3
LINC01879-201ENST00000611889 PARP1P09874 1014 aaKnown RBP13.19□□□□□ -0.3
LINC01879-201ENST00000611889 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
LINC01879-201ENST00000611889 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 TRIM22Q8IYM9 498 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 CSADQ9Y600 493 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 PHIPQ8WWQ0 1821 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 PDHBP11177 359 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 JAG1P78504 1218 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 MAP3K9P80192 1104 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 ATP2B2Q01814 1243 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 SIAH1Q8IUQ4 282 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
LINC01879-201ENST00000611889 GMCL1Q96IK5 515 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 WDR18Q9BV38 432 aa13.19□□□□□ -0.3
LINC01879-201ENST00000611889 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
LINC01879-201ENST00000611889 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
LINC01879-201ENST00000611889 PTPDC1A2A3K4 754 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 CDC27P30260 824 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 DDIT3P35638 169 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 NTRK3Q16288 839 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 LRRC47Q8N1G4 583 aaKnown RBP13.18□□□□□ -0.3
LINC01879-201ENST00000611889 WASF1Q92558 559 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
LINC01879-201ENST00000611889 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 RXRAP19793 462 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 INPP5BP32019 993 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 ADD1P35611 737 aaKnown RBP13.18□□□□□ -0.3
LINC01879-201ENST00000611889 USP14P54578 494 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 MAP1SQ66K74 1059 aaPredicted RBP13.18□□□□□ -0.3
LINC01879-201ENST00000611889 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 TMTC3Q6ZXV5 915 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 LPAR1Q92633 364 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
LINC01879-201ENST00000611889 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
LINC01879-201ENST00000611889 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
LINC01879-201ENST00000611889 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 GJB2P29033 226 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
LINC01879-201ENST00000611889 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 FAM184AQ8NB25 1140 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 F5H6K3 240 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 PTPRAP18433 802 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 NUCB2P80303 420 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 KLRC3Q07444 240 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
LINC01879-201ENST00000611889 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
LINC01879-201ENST00000611889 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
LINC01879-201ENST00000611889 HSPA1AP0DMV8 641 aaKnown RBP13.16□□□□□ -0.3
LINC01879-201ENST00000611889 HSPA1BP0DMV9 641 aaKnown RBP13.16□□□□□ -0.3
LINC01879-201ENST00000611889 SLC1A4P43007 532 aa13.16□□□□□ -0.3
LINC01879-201ENST00000611889 AKAP17AQ02040 695 aaKnown RBP13.16□□□□□ -0.3
LINC01879-201ENST00000611889 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
LINC01879-201ENST00000611889 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
LINC01879-201ENST00000611889 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.16□□□□□ -0.3
LINC01879-201ENST00000611889 RAB11FIP4Q86YS3 637 aa13.16□□□□□ -0.3
LINC01879-201ENST00000611889 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
LINC01879-201ENST00000611889 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms