RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 SCYL3Q8IZE3 742 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTCFL-214ENST00000608108 ZKSCAN4Q969J2 545 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-214ENST00000608108 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
CTCFL-214ENST00000608108 GINM1Q9NU53 330 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 NID2Q14112 1375 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 PHIPQ8WWQ0 1821 aa13.01□□□□□ -0.33
CTCFL-214ENST00000608108 BAZ2BQ9UIF8 2168 aaKnown RBP13□□□□□ -0.33
CTCFL-214ENST00000608108 PITPNM1O00562 1244 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 CALM1P0DP23 149 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 CALM2P0DP24 149 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 CALM3P0DP25 149 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
CTCFL-214ENST00000608108 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 ZNF408Q9H9D4 720 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 PICK1Q9NRD5 415 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 MTMR7Q9Y216 660 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 MYH6P13533 1939 aa13□□□□□ -0.33
CTCFL-214ENST00000608108 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
CTCFL-214ENST00000608108 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.339e-8■■□□□ 14.3
CTCFL-214ENST00000608108 RTN1Q16799 776 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 NOL9Q5SY16 702 aaKnown RBP12.99□□□□□ -0.33
CTCFL-214ENST00000608108 CCDC84Q86UT8 332 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-214ENST00000608108 SIAH1Q8IUQ4 282 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 FANCBQ8NB91 859 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-214ENST00000608108 MKL1Q969V6 931 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 CPLX1O14810 134 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 CDC27P30260 824 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 ECE1P42892 770 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 VGLL4Q14135 290 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 MOB2Q70IA6 237 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 ARMC9Q7Z3E5 817 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 CHMP4CQ96CF2 233 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 INTS4Q96HW7 963 aaKnown RBP12.99□□□□□ -0.33
CTCFL-214ENST00000608108 SYNPO2Q9UMS6 1093 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-214ENST00000608108 CSADQ9Y600 493 aa12.99□□□□□ -0.33
CTCFL-214ENST00000608108 CCDC196A0A1B0GTZ2 297 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 A0A1W2PRG0 241 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 RAD21O60216 631 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 PTPRAP18433 802 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 KIF5BP33176 963 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 ADD1P35611 737 aaKnown RBP12.98□□□□□ -0.33
CTCFL-214ENST00000608108 GRM4Q14833 912 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 PPP2R5BQ15173 497 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 MAP3K11Q16584 847 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-214ENST00000608108 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 FEZ1Q99689 392 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 SH2D4AQ9H788 454 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-214ENST00000608108 RBM28Q9NW13 759 aaKnown RBP12.98□□□□□ -0.33
CTCFL-214ENST00000608108 PTPRFP10586 1907 aa12.98□□□□□ -0.33
CTCFL-214ENST00000608108 KIF3CO14782 793 aa12.97□□□□□ -0.33
CTCFL-214ENST00000608108 CELF2O95319 508 aaKnown RBP12.97□□□□□ -0.33
CTCFL-214ENST00000608108 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-214ENST00000608108 PDHBP11177 359 aa12.97□□□□□ -0.33
CTCFL-214ENST00000608108 ANKRD13AQ8IZ07 590 aa12.97□□□□□ -0.33
CTCFL-214ENST00000608108 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
CTCFL-214ENST00000608108 LLPHQ9BRT6 129 aaKnown RBP12.97□□□□□ -0.33
CTCFL-214ENST00000608108 AS3MTQ9HBK9 375 aa12.97□□□□□ -0.33
CTCFL-214ENST00000608108 TMX2Q9Y320 296 aa12.97□□□□□ -0.33
CTCFL-214ENST00000608108 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
CTCFL-214ENST00000608108 JAK2O60674 1132 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 DTNBO60941 627 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 CDKL5O76039 1030 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 CTDNEP1O95476 244 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.33
CTCFL-214ENST00000608108 SNHG28P0DPA3 235 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 YY1P25490 414 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 FKBP1BP68106 108 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 ZYXQ15942 572 aaKnown RBP12.96□□□□□ -0.33
CTCFL-214ENST00000608108 SLFN13Q68D06 897 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 CPLX2Q6PUV4 134 aaKnown RBP12.96□□□□□ -0.33
CTCFL-214ENST00000608108 NSUN7Q8NE18 718 aaKnown RBP12.96□□□□□ -0.33
CTCFL-214ENST00000608108 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-214ENST00000608108 MAD2L2Q9UI95 211 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 SMC3Q9UQE7 1217 aa12.96□□□□□ -0.33
CTCFL-214ENST00000608108 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.34
CTCFL-214ENST00000608108 PTPDC1A2A3K4 754 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 F5H6K3 240 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 PLEKHA8P1O95397 391 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 NDUFB10O96000 172 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 SLC1A4P43007 532 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 KLRC3Q07444 240 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 TMTC3Q6ZXV5 915 aa12.95□□□□□ -0.34
CTCFL-214ENST00000608108 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms