RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 FAM161BQ96MY7 647 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
CTSA-218ENST00000607814 DDX20Q9UHI6 824 aaKnown RBP16.41■□□□□ 0.22
CTSA-218ENST00000607814 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 PEX10O60683 326 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 HLA-DOAP06340 250 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 HDAC1Q13547 482 aaPredicted RBP16.4■□□□□ 0.22
CTSA-218ENST00000607814 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 C12orf42Q96LP6 360 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 CDX2Q99626 313 aaPredicted RBP16.4■□□□□ 0.22
CTSA-218ENST00000607814 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
CTSA-218ENST00000607814 PRDM6Q9NQX0 595 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 ZBTB21Q9ULJ3 1066 aa16.4■□□□□ 0.22
CTSA-218ENST00000607814 SLC15A5A6NIM6 579 aa16.39■□□□□ 0.21
CTSA-218ENST00000607814 POLR3DP05423 398 aaPredicted RBP16.39■□□□□ 0.21
CTSA-218ENST00000607814 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
CTSA-218ENST00000607814 PI4K2BQ8TCG2 481 aa16.39■□□□□ 0.21
CTSA-218ENST00000607814 CRNKL1Q9BZJ0 848 aaKnown RBP16.39■□□□□ 0.21
CTSA-218ENST00000607814 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTSA-218ENST00000607814 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
CTSA-218ENST00000607814 EMILIN3Q9NT22 766 aa16.39■□□□□ 0.21
CTSA-218ENST00000607814 CYP2D7A0A087X1C5 515 aa16.38■□□□□ 0.21
CTSA-218ENST00000607814 SMAD3P84022 425 aaKnown RBP16.38■□□□□ 0.21
CTSA-218ENST00000607814 POTEEQ6S8J3 1075 aa16.38■□□□□ 0.21
CTSA-218ENST00000607814 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
CTSA-218ENST00000607814 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
CTSA-218ENST00000607814 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
CTSA-218ENST00000607814 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
CTSA-218ENST00000607814 LTBP2Q14767 1821 aa16.38■□□□□ 0.21
CTSA-218ENST00000607814 FOCADQ5VW36 1801 aa16.38■□□□□ 0.21
CTSA-218ENST00000607814 MYH1P12882 1939 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L15C9J2P7 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L13C9JLJ4 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L11C9JVI0 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L18D6R9N7 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L22D6RA61 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L17D6RBQ6 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L19D6RCP7 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L20D6RJB6 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 MX1P20591 662 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 PTPREP23469 700 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 RTP1P59025 263 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 ATP2B2Q01814 1243 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 USP17L24Q0WX57 530 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 GRB14Q14449 540 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 UBE3CQ15386 1083 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 KBTBD3Q8NAB2 608 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 SLC44A5Q8NCS7 719 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 ARRDC4Q8NCT1 418 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 DYNLL2Q96FJ2 89 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
CTSA-218ENST00000607814 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
CTSA-218ENST00000607814 TMEM265A0A087WTH1 108 aa16.36■□□□□ 0.21
CTSA-218ENST00000607814 GH2P01242 217 aa16.36■□□□□ 0.21
CTSA-218ENST00000607814 ATN1P54259 1190 aaPredicted RBP16.36■□□□□ 0.21
CTSA-218ENST00000607814 USP14P54578 494 aa16.36■□□□□ 0.21
CTSA-218ENST00000607814 TTC6Q86TZ1 520 aa16.36■□□□□ 0.21
CTSA-218ENST00000607814 STK11IPQ8N1F8 1099 aa16.36■□□□□ 0.21
CTSA-218ENST00000607814 SEC62Q99442 399 aaKnown RBP16.36■□□□□ 0.21
CTSA-218ENST00000607814 RWDD1Q9H446 243 aaPredicted RBP16.36■□□□□ 0.21
CTSA-218ENST00000607814 FLRT1Q9NZU1 646 aa16.36■□□□□ 0.21
CTSA-218ENST00000607814 SERPINB13Q9UIV8 391 aa16.36■□□□□ 0.21
CTSA-218ENST00000607814 M0R2C6 588 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 CNMDO75829 334 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 IGHA2P01877 340 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 CNGA1P29973 690 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 SHMT1P34896 483 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 SHHQ15465 462 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 ZSCAN25Q6NSZ9 544 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 SALL3Q9BXA9 1300 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 RLFQ13129 1914 aa16.35■□□□□ 0.21
CTSA-218ENST00000607814 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
CTSA-218ENST00000607814 CYBAP13498 195 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 SNX17Q15036 470 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
CTSA-218ENST00000607814 CERKLQ49MI3 558 aaPredicted RBP16.34■□□□□ 0.21
CTSA-218ENST00000607814 WDR78Q5VTH9 848 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 OLFML2BQ68BL8 750 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 TMED8Q6PL24 325 aaPredicted RBP16.34■□□□□ 0.21
CTSA-218ENST00000607814 SLC39A5Q6ZMH5 540 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 CATSPERGQ6ZRH7 1159 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 STRBPQ96SI9 672 aaKnown RBP16.34■□□□□ 0.21
CTSA-218ENST00000607814 FEZ1Q99689 392 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 FSD1Q9BTV5 496 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 KIAA1683Q9H0B3 1180 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 ATP11BQ9Y2G3 1177 aa16.34■□□□□ 0.21
CTSA-218ENST00000607814 NCOR1O75376 2440 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 USP17L12C9JPN9 530 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 KBTBD13C9JR72 458 aa16.33■□□□□ 0.2
CTSA-218ENST00000607814 USP17L21D6R901 530 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms