RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
LINC00221-201ENST00000603633 CTCFP49711 727 aaPredicted RBP18.47■□□□□ 0.55
LINC00221-201ENST00000603633 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
LINC00221-201ENST00000603633 ZYXQ15942 572 aaKnown RBP18.47■□□□□ 0.55
LINC00221-201ENST00000603633 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
LINC00221-201ENST00000603633 DGKHQ86XP1 1220 aa18.47■□□□□ 0.55
LINC00221-201ENST00000603633 CLEC10AQ8IUN9 316 aa18.47■□□□□ 0.55
LINC00221-201ENST00000603633 UBAC1Q9BSL1 405 aa18.47■□□□□ 0.55
LINC00221-201ENST00000603633 VCAM1P19320 739 aa18.46■□□□□ 0.55
LINC00221-201ENST00000603633 SART3Q15020 963 aaKnown RBP18.46■□□□□ 0.55
LINC00221-201ENST00000603633 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
LINC00221-201ENST00000603633 OTOFQ9HC10 1997 aa18.45■□□□□ 0.54
LINC00221-201ENST00000603633 F5H6K3 240 aa18.45■□□□□ 0.54
LINC00221-201ENST00000603633 WDR46O15213 610 aaKnown RBP18.45■□□□□ 0.54
LINC00221-201ENST00000603633 TOP1P11387 765 aaKnown RBP18.45■□□□□ 0.54
LINC00221-201ENST00000603633 HSPA4P34932 840 aa18.45■□□□□ 0.54
LINC00221-201ENST00000603633 IRX3P78415 501 aaPredicted RBP18.45■□□□□ 0.54
LINC00221-201ENST00000603633 KLRC3Q07444 240 aa18.45■□□□□ 0.54
LINC00221-201ENST00000603633 GMCL1P1Q8NEA9 526 aa18.45■□□□□ 0.54
LINC00221-201ENST00000603633 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
LINC00221-201ENST00000603633 ZSCAN10Q96SZ4 725 aaPredicted RBP18.45■□□□□ 0.54
LINC00221-201ENST00000603633 MTA3Q9BTC8 594 aa18.45■□□□□ 0.54
LINC00221-201ENST00000603633 ERICH2A1L162 156 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 TLR2O60603 784 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 CRHR2Q13324 411 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
LINC00221-201ENST00000603633 ANKS1AQ92625 1134 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 KCNB2Q92953 911 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 DOCK1Q14185 1865 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 BAZ2AQ9UIF9 1905 aaKnown RBP18.44■□□□□ 0.54
LINC00221-201ENST00000603633 NMT2O60551 498 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 TBC1D8O95759 1140 aa18.44■□□□□ 0.54
LINC00221-201ENST00000603633 HMGB1P09429 215 aaKnown RBP18.44■□□□□ 0.54
LINC00221-201ENST00000603633 RPAP3Q9H6T3 665 aaPredicted RBP18.44■□□□□ 0.54
LINC00221-201ENST00000603633 FOXN1O15353 648 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 RAD21O60216 631 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 MCM5P33992 734 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 GCLCP48506 637 aaPredicted RBP18.43■□□□□ 0.54
LINC00221-201ENST00000603633 DGKZQ13574 1117 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 CATSPERGQ6ZRH7 1159 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 STOX1Q6ZVD7 989 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 LRRC47Q8N1G4 583 aaKnown RBP18.43■□□□□ 0.54
LINC00221-201ENST00000603633 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 ASCC2Q9H1I8 757 aaPredicted RBP18.43■□□□□ 0.54
LINC00221-201ENST00000603633 HOXC10Q9NYD6 342 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 TAF6LQ9Y6J9 622 aa18.43■□□□□ 0.54
LINC00221-201ENST00000603633 NDUFB10O96000 172 aa18.42■□□□□ 0.54
LINC00221-201ENST00000603633 SLFN13Q68D06 897 aa18.42■□□□□ 0.54
LINC00221-201ENST00000603633 MB21D2Q8IYB1 491 aaPredicted RBP18.42■□□□□ 0.54
LINC00221-201ENST00000603633 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
LINC00221-201ENST00000603633 GMCL1Q96IK5 515 aa18.42■□□□□ 0.54
LINC00221-201ENST00000603633 TMEM47Q9BQJ4 181 aa18.42■□□□□ 0.54
LINC00221-201ENST00000603633 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
LINC00221-201ENST00000603633 TNKSO95271 1327 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 CYP2C8P10632 490 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 PSMA5P28066 241 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 COG2Q14746 738 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 IFIT1BQ5T764 474 aaKnown RBP18.41■□□□□ 0.54
LINC00221-201ENST00000603633 TMTC2Q8N394 836 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 TANGO6Q9C0B7 1094 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 KAT14Q9H8E8 782 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 GPR25O00155 361 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 IFIT3O14879 490 aaKnown RBP18.41■□□□□ 0.54
LINC00221-201ENST00000603633 HSPA8P11142 646 aaKnown RBP18.41■□□□□ 0.54
LINC00221-201ENST00000603633 RCSD1Q6JBY9 416 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 CYB5R4Q7L1T6 521 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 RASEFQ8IZ41 740 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 ENAHQ8N8S7 591 aaPredicted RBP18.41■□□□□ 0.54
LINC00221-201ENST00000603633 TMEM87BQ96K49 555 aa18.41■□□□□ 0.54
LINC00221-201ENST00000603633 MYPNQ86TC9 1320 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 BMP3P12645 472 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 SLC1A4P43007 532 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 HERVK_113P62684 666 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 C8orf34Q49A92 452 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 KIAA1755Q5JYT7 1200 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 C17orf99Q6UX52 265 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 NKX2-3Q8TAU0 364 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 DCAF4Q8WV16 495 aa18.4■□□□□ 0.54
LINC00221-201ENST00000603633 LAMB1P07942 1786 aa18.39■□□□□ 0.54
LINC00221-201ENST00000603633 WDR19Q8NEZ3 1342 aa18.39■□□□□ 0.53
LINC00221-201ENST00000603633 FKTNO75072 461 aa18.39■□□□□ 0.53
LINC00221-201ENST00000603633 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.53
LINC00221-201ENST00000603633 LBX2Q6XYB7 198 aa18.39■□□□□ 0.53
LINC00221-201ENST00000603633 DHX32Q7L7V1 743 aaKnown RBP18.39■□□□□ 0.53
LINC00221-201ENST00000603633 P2RX7Q99572 595 aaKnown RBP18.39■□□□□ 0.53
LINC00221-201ENST00000603633 PRDM10Q9NQV6 1147 aa18.39■□□□□ 0.53
LINC00221-201ENST00000603633 TSKSQ9UJT2 592 aa18.39■□□□□ 0.53
LINC00221-201ENST00000603633 SNX14Q9Y5W7 946 aa18.39■□□□□ 0.53
LINC00221-201ENST00000603633 PRC1O43663 620 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 FLOT1O75955 427 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 SP3Q02447 781 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 WTAPQ15007 396 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 ARHGEF6Q15052 776 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 SEC23AQ15436 765 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 FAM83BQ5T0W9 1011 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 MB21D1Q8N884 522 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 PNMA1Q8ND90 353 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 R3HDMLQ9H3Y0 253 aa18.38■□□□□ 0.53
LINC00221-201ENST00000603633 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms