RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 CLIP2Q9UDT6 1046 aa21.16■□□□□ 0.98
KCNN4-208ENST00000601549 SCAF8Q9UPN6 1271 aaKnown RBP21.16■□□□□ 0.98
KCNN4-208ENST00000601549 HPS5Q9UPZ3 1129 aa21.16■□□□□ 0.98
KCNN4-208ENST00000601549 TMX2Q9Y320 296 aa21.16■□□□□ 0.98
KCNN4-208ENST00000601549 GOLGA8AA7E2F4 631 aa21.15■□□□□ 0.98
KCNN4-208ENST00000601549 EEF2P13639 858 aaKnown RBP21.15■□□□□ 0.98
KCNN4-208ENST00000601549 HMGN5P82970 282 aaKnown RBP21.15■□□□□ 0.98
KCNN4-208ENST00000601549 RRP1BQ14684 758 aaKnown RBP21.15■□□□□ 0.98
KCNN4-208ENST00000601549 RTN1Q16799 776 aa21.15■□□□□ 0.98
KCNN4-208ENST00000601549 GPATCH4Q5T3I0 446 aaKnown RBP21.15■□□□□ 0.98
KCNN4-208ENST00000601549 RGS22Q8NE09 1264 aa21.15■□□□□ 0.98
KCNN4-208ENST00000601549 GOPCQ9HD26 462 aa21.15■□□□□ 0.98
KCNN4-208ENST00000601549 RBM27Q9P2N5 1060 aaKnown RBP21.15■□□□□ 0.98
KCNN4-208ENST00000601549 CPLX1O14810 134 aa21.14■□□□□ 0.97
KCNN4-208ENST00000601549 SNHG28P0DPA3 235 aa21.14■□□□□ 0.97
KCNN4-208ENST00000601549 USP14P54578 494 aa21.14■□□□□ 0.97
KCNN4-208ENST00000601549 ASPRV1Q53RT3 343 aa21.14■□□□□ 0.97
KCNN4-208ENST00000601549 PRAMEF18Q5VWM3 479 aa21.14■□□□□ 0.97
KCNN4-208ENST00000601549 NOL8Q76FK4 1167 aaKnown RBP21.14■□□□□ 0.97
KCNN4-208ENST00000601549 DCAF4Q8WV16 495 aa21.14■□□□□ 0.97
KCNN4-208ENST00000601549 GMCL1Q96IK5 515 aa21.14■□□□□ 0.97
KCNN4-208ENST00000601549 NAP1L2Q9ULW6 460 aaPredicted RBP21.14■□□□□ 0.97
KCNN4-208ENST00000601549 TRAF5O00463 557 aa21.13■□□□□ 0.97
KCNN4-208ENST00000601549 GRM4Q14833 912 aa21.13■□□□□ 0.97
KCNN4-208ENST00000601549 MICU3Q86XE3 530 aa21.13■□□□□ 0.97
KCNN4-208ENST00000601549 LPAR1Q92633 364 aa21.13■□□□□ 0.97
KCNN4-208ENST00000601549 KIAA1683Q9H0B3 1180 aa21.13■□□□□ 0.97
KCNN4-208ENST00000601549 SENP2Q9HC62 589 aa21.13■□□□□ 0.97
KCNN4-208ENST00000601549 TMEM88BA6NKF7 163 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 C19orf81C9J6K1 198 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 SLURP2P0DP57 97 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 PTPRAP18433 802 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 INPP5BP32019 993 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 SCRN1Q12765 414 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 LDLRAD1Q5T700 205 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 SIAH1Q8IUQ4 282 aa21.12■□□□□ 0.97
KCNN4-208ENST00000601549 POLR2AP24928 1970 aaKnown RBP21.12■□□□□ 0.97
KCNN4-208ENST00000601549 CELF2O95319 508 aaKnown RBP21.11■□□□□ 0.97
KCNN4-208ENST00000601549 LARGE1O95461 756 aa21.11■□□□□ 0.97
KCNN4-208ENST00000601549 PARP1P09874 1014 aaKnown RBP21.11■□□□□ 0.97
KCNN4-208ENST00000601549 IFNAR1P17181 557 aa21.11■□□□□ 0.97
KCNN4-208ENST00000601549 JAG1P78504 1218 aa21.11■□□□□ 0.97
KCNN4-208ENST00000601549 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.11■□□□□ 0.97
KCNN4-208ENST00000601549 CCDC83Q8IWF9 413 aa21.11■□□□□ 0.97
KCNN4-208ENST00000601549 C2orf69Q8N8R5 385 aa21.11■□□□□ 0.97
KCNN4-208ENST00000601549 NUP133Q8WUM0 1156 aa21.11■□□□□ 0.97
KCNN4-208ENST00000601549 ZNF408Q9H9D4 720 aa21.11■□□□□ 0.97
KCNN4-208ENST00000601549 PAPPA2Q9BXP8 1791 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 STK36Q9NRP7 1315 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 PALM3A6NDB9 673 aaPredicted RBP21.1■□□□□ 0.97
KCNN4-208ENST00000601549 PDHBP11177 359 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 PDCP20941 246 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 ATP2B2Q01814 1243 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 PPATQ06203 517 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 STK3Q13188 491 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 TTLL12Q14166 644 aaPredicted RBP21.1■□□□□ 0.97
KCNN4-208ENST00000601549 ERO1BQ86YB8 467 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 FAM177A1Q8N128 213 aaPredicted RBP21.1■□□□□ 0.97
KCNN4-208ENST00000601549 ZNF280CQ8ND82 737 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 SMARCC2Q8TAQ2 1214 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 LARP6Q9BRS8 491 aaKnown RBP21.1■□□□□ 0.97
KCNN4-208ENST00000601549 VCPKMTQ9H867 229 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 CREBZFQ9NS37 354 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 SMC3Q9UQE7 1217 aa21.1■□□□□ 0.97
KCNN4-208ENST00000601549 DOCK1Q14185 1865 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 USP17L10C9JJH3 530 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 F5H6K3 240 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 PLA2G6O60733 806 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 KLRC3Q07444 240 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 VGLL4Q14135 290 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 TMTC3Q6ZXV5 915 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 TRIM22Q8IYM9 498 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 NECAB1Q8N987 351 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 JMYQ8N9B5 988 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 WASF1Q92558 559 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 ZKSCAN4Q969J2 545 aaPredicted RBP21.09■□□□□ 0.97
KCNN4-208ENST00000601549 GBA2Q9HCG7 927 aaPredicted RBP21.09■□□□□ 0.97
KCNN4-208ENST00000601549 SNCAIPQ9Y6H5 919 aa21.09■□□□□ 0.97
KCNN4-208ENST00000601549 SPDYE5A6NIY4 337 aa21.08■□□□□ 0.97
KCNN4-208ENST00000601549 CCT2P78371 535 aaKnown RBP21.08■□□□□ 0.97
KCNN4-208ENST00000601549 ZNF543Q08ER8 600 aa21.08■□□□□ 0.97
KCNN4-208ENST00000601549 SLFN13Q68D06 897 aa21.08■□□□□ 0.97
KCNN4-208ENST00000601549 C12orf42Q96LP6 360 aa21.08■□□□□ 0.97
KCNN4-208ENST00000601549 FEZ1Q99689 392 aa21.08■□□□□ 0.97
KCNN4-208ENST00000601549 SPZ1Q9BXG8 430 aa21.08■□□□□ 0.97
KCNN4-208ENST00000601549 RNF26Q9BY78 433 aaPredicted RBP21.08■□□□□ 0.97
KCNN4-208ENST00000601549 FAM217BQ9NTX9 383 aaPredicted RBP21.08■□□□□ 0.97
KCNN4-208ENST00000601549 CIZ1Q9ULV3 898 aaPredicted RBP21.08■□□□□ 0.97
KCNN4-208ENST00000601549 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
KCNN4-208ENST00000601549 CXCL11O14625 94 aa21.07■□□□□ 0.96
KCNN4-208ENST00000601549 SLC1A4P43007 532 aa21.07■□□□□ 0.96
KCNN4-208ENST00000601549 BACE1P56817 501 aa21.07■□□□□ 0.96
KCNN4-208ENST00000601549 NTRK3Q16288 839 aa21.07■□□□□ 0.96
KCNN4-208ENST00000601549 USP17L2Q6R6M4 530 aa21.07■□□□□ 0.96
KCNN4-208ENST00000601549 LRRC47Q8N1G4 583 aaKnown RBP21.07■□□□□ 0.96
KCNN4-208ENST00000601549 NSUN7Q8NE18 718 aaKnown RBP21.07■□□□□ 0.96
KCNN4-208ENST00000601549 MAD2L2Q9UI95 211 aa21.07■□□□□ 0.96
KCNN4-208ENST00000601549 PCNTO95613 3336 aa21.06■□□□□ 0.96
KCNN4-208ENST00000601549 A0A1W2PRG0 241 aa21.06■□□□□ 0.96
KCNN4-208ENST00000601549 WDR46O15213 610 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms