RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 MCM2P49736 904 aa26.84■■□□□ 1.89
IRF3-227ENST00000600911 CCDC178Q5BJE1 867 aa26.84■■□□□ 1.89
IRF3-227ENST00000600911 LDLRAD1Q5T700 205 aa26.84■■□□□ 1.89
IRF3-227ENST00000600911 NUP133Q8WUM0 1156 aa26.84■■□□□ 1.89
IRF3-227ENST00000600911 ELP3Q9H9T3 547 aa26.84■■□□□ 1.89
IRF3-227ENST00000600911 FOXD4L1Q9NU39 408 aa26.84■■□□□ 1.89
IRF3-227ENST00000600911 ZBTB43O43298 467 aa26.83■■□□□ 1.89
IRF3-227ENST00000600911 PPFIA3O75145 1194 aa26.83■■□□□ 1.89
IRF3-227ENST00000600911 TMTC2Q8N394 836 aa26.83■■□□□ 1.89
IRF3-227ENST00000600911 SPRYD3Q8NCJ5 442 aa26.83■■□□□ 1.89
IRF3-227ENST00000600911 GBA2Q9HCG7 927 aaPredicted RBP26.83■■□□□ 1.89
IRF3-227ENST00000600911 ZYXQ15942 572 aaKnown RBP26.83■■□□□ 1.88
IRF3-227ENST00000600911 GTF3C6Q969F1 213 aa26.83■■□□□ 1.88
IRF3-227ENST00000600911 NID2Q14112 1375 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 USP17L5A8MUK1 530 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 CTDNEP1O95476 244 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 ADD1P35611 737 aaKnown RBP26.82■■□□□ 1.88
IRF3-227ENST00000600911 CUL4AQ13619 759 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 ARMC9Q7Z3E5 817 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 STAG2Q8N3U4 1231 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 IL27Q8NEV9 243 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 SLKQ9H2G2 1235 aaPredicted RBP26.82■■□□□ 1.88
IRF3-227ENST00000600911 TMX2Q9Y320 296 aa26.82■■□□□ 1.88
IRF3-227ENST00000600911 BAZ2BQ9UIF8 2168 aaKnown RBP26.81■■□□□ 1.88
IRF3-227ENST00000600911 GOLGA8AA7E2F4 631 aa26.81■■□□□ 1.88
IRF3-227ENST00000600911 SLC35G1Q2M3R5 365 aa26.81■■□□□ 1.88
IRF3-227ENST00000600911 CATIPQ7Z7H3 387 aa26.81■■□□□ 1.88
IRF3-227ENST00000600911 ANKRD13AQ8IZ07 590 aa26.81■■□□□ 1.88
IRF3-227ENST00000600911 CMTR1Q8N1G2 835 aaKnown RBP26.81■■□□□ 1.88
IRF3-227ENST00000600911 ZSCAN31Q96LW9 406 aaPredicted RBP26.81■■□□□ 1.88
IRF3-227ENST00000600911 PICK1Q9NRD5 415 aa26.81■■□□□ 1.88
IRF3-227ENST00000600911 ZHX2Q9Y6X8 837 aa26.81■■□□□ 1.88
IRF3-227ENST00000600911 DDAH1O94760 285 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 TOMM70O94826 608 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 GOLGA8HP0CJ92 632 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 PDHBP11177 359 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 GJA5P36382 358 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 METAP2P50579 478 aaKnown RBP eCLIP26.8■■□□□ 1.88
IRF3-227ENST00000600911 USP17L2Q6R6M4 530 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 SMC1BQ8NDV3 1235 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 GINM1Q9NU53 330 aa26.8■■□□□ 1.88
IRF3-227ENST00000600911 PLEKHA8P1O95397 391 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 SPP2Q13103 211 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 NBPF11Q86T75 865 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 NUP88Q99567 741 aaPredicted RBP26.79■■□□□ 1.88
IRF3-227ENST00000600911 CPVLQ9H3G5 476 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 SH2B1Q9NRF2 756 aaPredicted RBP26.79■■□□□ 1.88
IRF3-227ENST00000600911 MAD2L2Q9UI95 211 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 CSADQ9Y600 493 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 FRMPD2Q68DX3 1309 aaPredicted RBP26.79■■□□□ 1.88
IRF3-227ENST00000600911 NDUFB10O96000 172 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 SNHG28P0DPA3 235 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 GRM4Q14833 912 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 SPICE1Q8N0Z3 855 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 FANCBQ8NB91 859 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 RBM46Q8TBY0 533 aaKnown RBP26.79■■□□□ 1.88
IRF3-227ENST00000600911 ARHGEF10LQ9HCE6 1279 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 AFG3L2Q9Y4W6 797 aa26.79■■□□□ 1.88
IRF3-227ENST00000600911 TRIM75PA6NK02 468 aa26.78■■□□□ 1.88
IRF3-227ENST00000600911 F5H6K3 240 aa26.78■■□□□ 1.88
IRF3-227ENST00000600911 KLRC3Q07444 240 aa26.78■■□□□ 1.88
IRF3-227ENST00000600911 MTMR2Q13614 643 aa26.78■■□□□ 1.88
IRF3-227ENST00000600911 BECN1Q14457 450 aa26.78■■□□□ 1.88
IRF3-227ENST00000600911 NTRK3Q16288 839 aa26.78■■□□□ 1.88
IRF3-227ENST00000600911 WDR18Q9BV38 432 aa26.78■■□□□ 1.88
IRF3-227ENST00000600911 RAD21O60216 631 aa26.77■■□□□ 1.88
IRF3-227ENST00000600911 JAK2O60674 1132 aa26.77■■□□□ 1.88
IRF3-227ENST00000600911 RTN1Q16799 776 aa26.77■■□□□ 1.88
IRF3-227ENST00000600911 MYH6P13533 1939 aa26.77■■□□□ 1.88
IRF3-227ENST00000600911 SLFN13Q68D06 897 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 SYNE3Q6ZMZ3 975 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 ZNF280CQ8ND82 737 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 GMCL1P1Q8NEA9 526 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 OTUD5Q96G74 571 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 IPO9Q96P70 1041 aaKnown RBP26.76■■□□□ 1.87
IRF3-227ENST00000600911 EMILIN3Q9NT22 766 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 PARP14Q460N5 1801 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 SPDYE5A6NIY4 337 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 TTBK2Q6IQ55 1244 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 KCTD1Q719H9 257 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 C2orf69Q8N8R5 385 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 VCPKMTQ9H867 229 aa26.76■■□□□ 1.87
IRF3-227ENST00000600911 LOC285556D6RIA3 1793 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 PALM3A6NDB9 673 aaPredicted RBP26.75■■□□□ 1.87
IRF3-227ENST00000600911 IRF6O14896 467 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 RCAN1P53805 252 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 FKBP1BP68106 108 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 FUT2Q10981 343 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 CCDC82Q8N4S0 544 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 SRBD1Q8N5C6 995 aaKnown RBP26.75■■□□□ 1.87
IRF3-227ENST00000600911 NSUN7Q8NE18 718 aaKnown RBP26.75■■□□□ 1.87
IRF3-227ENST00000600911 OPTNQ96CV9 577 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 KIAA1683Q9H0B3 1180 aa26.75■■□□□ 1.87
IRF3-227ENST00000600911 ZNF543Q08ER8 600 aa26.74■■□□□ 1.87
IRF3-227ENST00000600911 PPP4R3BQ5MIZ7 849 aa26.74■■□□□ 1.87
IRF3-227ENST00000600911 FEZ1Q99689 392 aa26.74■■□□□ 1.87
IRF3-227ENST00000600911 USP17L10C9JJH3 530 aa26.73■■□□□ 1.87
IRF3-227ENST00000600911 BACE1P56817 501 aa26.73■■□□□ 1.87
IRF3-227ENST00000600911 TMTC3Q6ZXV5 915 aa26.73■■□□□ 1.87
IRF3-227ENST00000600911 ERO1BQ86YB8 467 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms