RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 CCL14Q16627 93 aa18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 TRMT44Q8IYL2 757 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 DIS3LQ8TF46 1054 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 CCDC17Q96LX7 622 aa18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 STRBPQ96SI9 672 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 TANGO6Q9C0B7 1094 aa18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 ARHGEF10LQ9HCE6 1279 aa18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 ARPP21Q9UBL0 812 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 ALPK3Q96L96 1907 aa18.06■□□□□ 0.48
SHKBP1-226ENST00000600791 PARP14Q460N5 1801 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 MAP2K5Q13163 448 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 WDR78Q5VTH9 848 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 APPBP2Q92624 585 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 LPAR1Q92633 364 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 OSBP2Q969R2 916 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 PAWRQ96IZ0 340 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 SH2D4AQ9H788 454 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 TMX2Q9Y320 296 aa18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 GREB1LQ9C091 1923 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-226ENST00000600791 RNF113AO15541 343 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 GLRX3O76003 335 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 PTPREP23469 700 aa18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 CACNB2Q08289 660 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 COG2Q14746 738 aa18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 SPICE1Q8N0Z3 855 aa18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 ANKLE1Q8NAG6 615 aa18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 VCPKMTQ9H867 229 aa18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 ZNF236Q9UL36 1845 aa18.04■□□□□ 0.48
SHKBP1-226ENST00000600791 TTC41PQ6P2S7 1318 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 SLC15A5A6NIM6 579 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 ZFYP08048 801 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 MNX1P50219 401 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 GRB14Q14449 540 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 NECAB2Q7Z6G3 386 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 PI4K2BQ8TCG2 481 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 OTUD7AQ8TE49 926 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 HOXC10Q9NYD6 342 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 OGDHLQ9ULD0 1010 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 IVNS1ABPQ9Y6Y0 642 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 ROBO3Q96MS0 1386 aa18.03■□□□□ 0.48
SHKBP1-226ENST00000600791 GPAA1O43292 621 aa18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 EEF2P13639 858 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 CCND3P30281 292 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 SBK1Q52WX2 424 aa18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 GIMAP6Q6P9H5 292 aa18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 MOV10L1Q9BXT6 1211 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 EPB41L4AQ9HCS5 686 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 FLRT1Q9NZU1 646 aa18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 NR2E3Q9Y5X4 410 aa18.02■□□□□ 0.48
SHKBP1-226ENST00000600791 FRMPD3Q5JV73 1810 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 M0R2C6 588 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 WDR46O15213 610 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 EVI5O60447 810 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 FLOT1O75955 427 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 HOXC6P09630 235 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 DSG3P32926 999 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 FXR1P51114 621 aaKnown RBP eCLIP18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 ATP2B2Q01814 1243 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 MB21D1Q8N884 522 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 KANSL2Q9H9L4 492 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 SZT2Q5T011 3432 aa18.01■□□□□ 0.47
SHKBP1-226ENST00000600791 ERC2O15083 957 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 RASA1P20936 1047 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 STK11IPQ8N1F8 1099 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 SHCBP1Q8NEM2 672 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 ATG4CQ96DT6 458 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 CRBNQ96SW2 442 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 NBPF3Q9H094 633 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 LAMA3Q16787 3333 aa18■□□□□ 0.47
SHKBP1-226ENST00000600791 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
SHKBP1-226ENST00000600791 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 GNAT2P19087 354 aa17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 MX1P20591 662 aa17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 TDO2P48775 406 aa17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 LHX8Q68G74 356 aa17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 NPLOC4Q8TAT6 608 aa17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 RBM27Q9P2N5 1060 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-226ENST00000600791 SALL3Q9BXA9 1300 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 ERCC3P19447 782 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 ADORA2AP29274 412 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 PLS1Q14651 629 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 MFSD14CQ5VZR4 134 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 SEC62Q99442 399 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 FSD1Q9BTV5 496 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 PRO3102Q9H379 93 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 C11orf49Q9H6J7 331 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 GOPCQ9HD26 462 aa17.98■□□□□ 0.47
SHKBP1-226ENST00000600791 STRNO43815 780 aa17.97■□□□□ 0.47
SHKBP1-226ENST00000600791 RAD21O60216 631 aa17.97■□□□□ 0.47
SHKBP1-226ENST00000600791 IGHA2P01877 340 aa17.97■□□□□ 0.47
SHKBP1-226ENST00000600791 FBXO28Q9NVF7 368 aa17.97■□□□□ 0.47
SHKBP1-226ENST00000600791 PFASO15067 1338 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms