RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 USP17L17D6RBQ6 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L19D6RCP7 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L20D6RJB6 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 USP17L24Q0WX57 530 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 FAM47AQ5JRC9 791 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 TBC1D10CQ8IV04 446 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 NEDD1Q8NHV4 660 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 CEP95Q96GE4 821 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 NYAP2Q9P242 653 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 PTCH2Q9Y6C5 1203 aa18.74■□□□□ 0.59
RPS28-203ENST00000600659 SPDYE16A6NNV3 312 aaPredicted RBP18.73■□□□□ 0.59
RPS28-203ENST00000600659 ORC4O43929 436 aa18.73■□□□□ 0.59
RPS28-203ENST00000600659 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
RPS28-203ENST00000600659 PDE4BQ07343 736 aa18.73■□□□□ 0.59
RPS28-203ENST00000600659 LBX2Q6XYB7 198 aa18.73■□□□□ 0.59
RPS28-203ENST00000600659 LPAR1Q92633 364 aa18.73■□□□□ 0.59
RPS28-203ENST00000600659 DSCC1Q9BVC3 393 aa18.73■□□□□ 0.59
RPS28-203ENST00000600659 MTMR4Q9NYA4 1195 aa18.73■□□□□ 0.59
RPS28-203ENST00000600659 RAD50Q92878 1312 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 CAPN15O75808 1086 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 GNRH1P01148 92 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 NOVP48745 357 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 HAND2P61296 217 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 Q3C1V9 767 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 ZNF444Q8N0Y2 327 aaPredicted RBP18.72■□□□□ 0.59
RPS28-203ENST00000600659 SPICE1Q8N0Z3 855 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 IL17RBQ9NRM6 502 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 SRRDQ9UH36 339 aa18.72■□□□□ 0.59
RPS28-203ENST00000600659 KIAA0100Q14667 2235 aaKnown RBP18.71■□□□□ 0.59
RPS28-203ENST00000600659 SLC3A2P08195 630 aaKnown RBP18.71■□□□□ 0.59
RPS28-203ENST00000600659 TFAP4Q01664 338 aa18.71■□□□□ 0.59
RPS28-203ENST00000600659 KIF22Q14807 665 aa18.71■□□□□ 0.59
RPS28-203ENST00000600659 MKL1Q969V6 931 aa18.71■□□□□ 0.59
RPS28-203ENST00000600659 CCDC136Q96JN2 1154 aa18.71■□□□□ 0.59
RPS28-203ENST00000600659 SH2D4AQ9H788 454 aa18.71■□□□□ 0.59
RPS28-203ENST00000600659 GABRQQ9UN88 632 aa18.71■□□□□ 0.59
RPS28-203ENST00000600659 WDR46O15213 610 aaKnown RBP18.7■□□□□ 0.58
RPS28-203ENST00000600659 FCGRTP55899 365 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 ERVK-9P63128 1117 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 ERVK-24P63145 666 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 ATP2B2Q01814 1243 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 PRKCZQ05513 592 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 STAG1Q8WVM7 1258 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 ARMC5Q96C12 935 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 NEDD4P46934 1319 aa18.7■□□□□ 0.58
RPS28-203ENST00000600659 SGSM2O43147 1006 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 NMT2O60551 498 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 FMNL1O95466 1100 aaPredicted RBP18.69■□□□□ 0.58
RPS28-203ENST00000600659 NDUFB10O96000 172 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 TSPY3P0CV98 308 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 TSPY8P0CW00 308 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 ARHGEF6Q15052 776 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 GTF3C2Q8WUA4 911 aaPredicted RBP18.69■□□□□ 0.58
RPS28-203ENST00000600659 PORCNQ9H237 461 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 MYPNQ86TC9 1320 aa18.69■□□□□ 0.58
RPS28-203ENST00000600659 CCDC85CA6NKD9 419 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 PRMT2P55345 433 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 PTH1RQ03431 593 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 BMP2KLQ5H9B9 411 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 AKNAD1Q5T1N1 836 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 PAGR1Q9BTK6 254 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 TANGO6Q9C0B7 1094 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 FBXO28Q9NVF7 368 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 CLIP2Q9UDT6 1046 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 GJD2Q9UKL4 321 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 SYNPO2Q9UMS6 1093 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 RABGAP1Q9Y3P9 1069 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 ZNF236Q9UL36 1845 aa18.68■□□□□ 0.58
RPS28-203ENST00000600659 F5H6K3 240 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 TNPO2O14787 897 aaKnown RBP18.67■□□□□ 0.58
RPS28-203ENST00000600659 TTLL1O95922 423 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 NEFLP07196 543 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
RPS28-203ENST00000600659 DSG3P32926 999 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 KLRC3Q07444 240 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 LRRC47Q8N1G4 583 aaKnown RBP18.67■□□□□ 0.58
RPS28-203ENST00000600659 GPRC5AQ8NFJ5 357 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 ATG4CQ96DT6 458 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 NUP88Q99567 741 aaPredicted RBP18.67■□□□□ 0.58
RPS28-203ENST00000600659 GOPCQ9HD26 462 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 ADAMTS5Q9UNA0 930 aa18.67■□□□□ 0.58
RPS28-203ENST00000600659 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
RPS28-203ENST00000600659 RANBP6O60518 1105 aaKnown RBP18.66■□□□□ 0.58
RPS28-203ENST00000600659 FLT3LGP49771 235 aa18.66■□□□□ 0.58
RPS28-203ENST00000600659 COG2Q14746 738 aa18.66■□□□□ 0.58
RPS28-203ENST00000600659 RASGRP2Q7LDG7 609 aa18.66■□□□□ 0.58
RPS28-203ENST00000600659 GMCL1P1Q8NEA9 526 aa18.66■□□□□ 0.58
RPS28-203ENST00000600659 ZNF333Q96JL9 665 aa18.66■□□□□ 0.58
RPS28-203ENST00000600659 MKI67P46013 3256 aaKnown RBP18.65■□□□□ 0.58
RPS28-203ENST00000600659 FLOT1O75955 427 aa18.65■□□□□ 0.58
RPS28-203ENST00000600659 PCP11498 1178 aaKnown RBP18.65■□□□□ 0.58
RPS28-203ENST00000600659 REPS2Q8NFH8 660 aa18.65■□□□□ 0.58
RPS28-203ENST00000600659 SH3TC2Q8TF17 1288 aa18.65■□□□□ 0.58
RPS28-203ENST00000600659 ZNFX1Q9P2E3 1918 aaKnown RBP18.65■□□□□ 0.58
RPS28-203ENST00000600659 ZNF213O14771 459 aa18.64■□□□□ 0.57
RPS28-203ENST00000600659 HOXD10P28358 340 aa18.64■□□□□ 0.57
RPS28-203ENST00000600659 IRF5Q13568 498 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms