RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
VRK3-221ENST00000600284 MAP3K21Q5TCX8 1036 aa18.95■□□□□ 0.62
VRK3-221ENST00000600284 TSHZ3Q63HK5 1081 aa18.95■□□□□ 0.62
VRK3-221ENST00000600284 CWC22Q9HCG8 908 aaKnown RBP18.95■□□□□ 0.62
VRK3-221ENST00000600284 AAMPQ13685 434 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 MB21D1Q8N884 522 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 ANKLE1Q8NAG6 615 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 PI4K2BQ8TCG2 481 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 DPF3Q92784 378 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 APBA2Q99767 749 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 VCPKMTQ9H867 229 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 BTBD7Q9P203 1132 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 PLXNB2O15031 1838 aa18.94■□□□□ 0.62
VRK3-221ENST00000600284 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
VRK3-221ENST00000600284 SLC15A5A6NIM6 579 aa18.93■□□□□ 0.62
VRK3-221ENST00000600284 SMIM22K7EJ46 135 aa18.93■□□□□ 0.62
VRK3-221ENST00000600284 ZKSCAN1P17029 563 aaPredicted RBP18.93■□□□□ 0.62
VRK3-221ENST00000600284 TRIM32Q13049 653 aa18.93■□□□□ 0.62
VRK3-221ENST00000600284 MAP2K5Q13163 448 aa18.93■□□□□ 0.62
VRK3-221ENST00000600284 TANGO6Q9C0B7 1094 aa18.93■□□□□ 0.62
VRK3-221ENST00000600284 ZBTB47Q9UFB7 747 aaPredicted RBP18.93■□□□□ 0.62
VRK3-221ENST00000600284 PATL2C9JE40 543 aaKnown RBP18.92■□□□□ 0.62
VRK3-221ENST00000600284 WDR46O15213 610 aaKnown RBP18.92■□□□□ 0.62
VRK3-221ENST00000600284 GPAA1O43292 621 aa18.92■□□□□ 0.62
VRK3-221ENST00000600284 MX1P20591 662 aa18.92■□□□□ 0.62
VRK3-221ENST00000600284 PTPREP23469 700 aa18.92■□□□□ 0.62
VRK3-221ENST00000600284 DSG3P32926 999 aa18.92■□□□□ 0.62
VRK3-221ENST00000600284 HDAC1Q13547 482 aaPredicted RBP18.92■□□□□ 0.62
VRK3-221ENST00000600284 CRBNQ96SW2 442 aa18.92■□□□□ 0.62
VRK3-221ENST00000600284 IVNS1ABPQ9Y6Y0 642 aa18.92■□□□□ 0.62
VRK3-221ENST00000600284 STRNO43815 780 aa18.91■□□□□ 0.62
VRK3-221ENST00000600284 HOXC6P09630 235 aa18.91■□□□□ 0.62
VRK3-221ENST00000600284 EEF2P13639 858 aaKnown RBP18.91■□□□□ 0.62
VRK3-221ENST00000600284 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
VRK3-221ENST00000600284 HABP4Q5JVS0 413 aaKnown RBP18.91■□□□□ 0.62
VRK3-221ENST00000600284 KIAA1755Q5JYT7 1200 aa18.91■□□□□ 0.62
VRK3-221ENST00000600284 SHCBP1Q8NEM2 672 aa18.91■□□□□ 0.62
VRK3-221ENST00000600284 ZNF287Q9HBT7 754 aa18.91■□□□□ 0.62
VRK3-221ENST00000600284 NR2E3Q9Y5X4 410 aa18.91■□□□□ 0.62
VRK3-221ENST00000600284 ROBO3Q96MS0 1386 aa18.91■□□□□ 0.62
VRK3-221ENST00000600284 H0YGN5 161 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 CACNB2Q08289 660 aaPredicted RBP18.9■□□□□ 0.62
VRK3-221ENST00000600284 GRB14Q14449 540 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 ANKRD45Q5TZF3 282 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 WDR78Q5VTH9 848 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 NECAB2Q7Z6G3 386 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 CLEC10AQ8IUN9 316 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 OTUD7AQ8TE49 926 aaPredicted RBP18.9■□□□□ 0.62
VRK3-221ENST00000600284 MKNK2Q9HBH9 465 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 GOPCQ9HD26 462 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 OGDHLQ9ULD0 1010 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 SALL3Q9BXA9 1300 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 MYH8P13535 1937 aa18.9■□□□□ 0.62
VRK3-221ENST00000600284 MINDY4BA8MYZ0 360 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 M0R2C6 588 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 FLOT1O75955 427 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 RASA1P20936 1047 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 TDO2P48775 406 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 IFNL3Q8IZI9 196 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 SPICE1Q8N0Z3 855 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 PAWRQ96IZ0 340 aaKnown RBP18.89■□□□□ 0.61
VRK3-221ENST00000600284 FSD1Q9BTV5 496 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 MOV10L1Q9BXT6 1211 aaKnown RBP18.89■□□□□ 0.61
VRK3-221ENST00000600284 NACAP1Q9BZK3 213 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 SPATC1LQ9H0A9 340 aa18.89■□□□□ 0.61
VRK3-221ENST00000600284 EPB41L4AQ9HCS5 686 aaPredicted RBP18.89■□□□□ 0.61
VRK3-221ENST00000600284 APPP05067 770 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 CCL14Q16627 93 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 ZMYM1Q5SVZ6 1142 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 MFSD14CQ5VZR4 134 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.88■□□□□ 0.61
VRK3-221ENST00000600284 MROH8Q9H579 483 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 STAP2Q9UGK3 403 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 ADAMTS5Q9UNA0 930 aa18.88■□□□□ 0.61
VRK3-221ENST00000600284 TICAM2Q86XR7 235 aa18.87■□□□□ 0.61
VRK3-221ENST00000600284 ZNF444Q8N0Y2 327 aaPredicted RBP18.87■□□□□ 0.61
VRK3-221ENST00000600284 NBPF3Q9H094 633 aa18.87■□□□□ 0.61
VRK3-221ENST00000600284 COLQQ9Y215 455 aaPredicted RBP18.87■□□□□ 0.61
VRK3-221ENST00000600284 EVI5O60447 810 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 SLC25A27O95847 323 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 ERCC3P19447 782 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 ABRAQ8N0Z2 381 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 ATG4CQ96DT6 458 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
VRK3-221ENST00000600284 SLC5A4Q9NY91 659 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 SYNPO2Q9UMS6 1093 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 RLFQ13129 1914 aa18.86■□□□□ 0.61
VRK3-221ENST00000600284 IGHA2P01877 340 aa18.85■□□□□ 0.61
VRK3-221ENST00000600284 MNX1P50219 401 aaPredicted RBP18.85■□□□□ 0.61
VRK3-221ENST00000600284 PDE4BQ07343 736 aa18.85■□□□□ 0.61
VRK3-221ENST00000600284 OLFML2BQ68BL8 750 aa18.85■□□□□ 0.61
VRK3-221ENST00000600284 DPP9Q86TI2 863 aa18.85■□□□□ 0.61
VRK3-221ENST00000600284 MKL1Q969V6 931 aa18.85■□□□□ 0.61
VRK3-221ENST00000600284 EVI5LQ96CN4 794 aa18.85■□□□□ 0.61
VRK3-221ENST00000600284 SEC62Q99442 399 aaKnown RBP18.85■□□□□ 0.61
VRK3-221ENST00000600284 A0A0G2JMZ2 1700 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 IGKV6D-41A0A0C4DH26 115 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 MSCO60682 206 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms