RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 SPDYE16A6NNV3 312 aaPredicted RBP27.55■■■□□ 2
SSBP4-205ENST00000598159 FSD1Q9BTV5 496 aa27.55■■■□□ 2
SSBP4-205ENST00000598159 CWC22Q9HCG8 908 aaKnown RBP27.55■■■□□ 2
SSBP4-205ENST00000598159 PAK6Q9NQU5 681 aaPredicted RBP27.55■■■□□ 2
SSBP4-205ENST00000598159 MKI67P46013 3256 aaKnown RBP27.55■■■□□ 2
SSBP4-205ENST00000598159 MINDY4BA8MYZ0 360 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 TFRCP02786 760 aaKnown RBP27.54■■■□□ 2
SSBP4-205ENST00000598159 APPP05067 770 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 MORN1Q5T089 497 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 RPTORQ8N122 1335 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 USP6NLQ92738 828 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 SALL3Q9BXA9 1300 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 VCPKMTQ9H867 229 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 MKNK2Q9HBH9 465 aa27.54■■■□□ 2
SSBP4-205ENST00000598159 M0R2C6 588 aa27.53■■■□□ 2
SSBP4-205ENST00000598159 DEFB118Q96PH6 123 aa27.53■■■□□ 2
SSBP4-205ENST00000598159 TANGO6Q9C0B7 1094 aa27.53■■■□□ 2
SSBP4-205ENST00000598159 HMX1Q9NP08 348 aaPredicted RBP27.53■■■□□ 2
SSBP4-205ENST00000598159 BTBD7Q9P203 1132 aa27.53■■■□□ 2
SSBP4-205ENST00000598159 STAP2Q9UGK3 403 aa27.53■■■□□ 2
SSBP4-205ENST00000598159 EEF2P13639 858 aaKnown RBP27.52■■■□□ 2
SSBP4-205ENST00000598159 RGS2P41220 211 aa27.52■■■□□ 2
SSBP4-205ENST00000598159 KIAA1755Q5JYT7 1200 aa27.52■■■□□ 2
SSBP4-205ENST00000598159 UBE2Q1Q7Z7E8 422 aa27.52■■■□□ 2
SSBP4-205ENST00000598159 TRIB2Q92519 343 aa27.52■■■□□ 2
SSBP4-205ENST00000598159 ZNF287Q9HBT7 754 aa27.52■■■□□ 2
SSBP4-205ENST00000598159 TDO2P48775 406 aa27.51■■□□□ 1.99
SSBP4-205ENST00000598159 ZMYM1Q5SVZ6 1142 aa27.51■■□□□ 1.99
SSBP4-205ENST00000598159 CLEC10AQ8IUN9 316 aa27.51■■□□□ 1.99
SSBP4-205ENST00000598159 IFNL3Q8IZI9 196 aa27.51■■□□□ 1.99
SSBP4-205ENST00000598159 NACAP1Q9BZK3 213 aa27.51■■□□□ 1.99
SSBP4-205ENST00000598159 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.51■■□□□ 1.995e-6■■■□□ 19.2
SSBP4-205ENST00000598159 RWDD1Q9H446 243 aaPredicted RBP27.51■■□□□ 1.99
SSBP4-205ENST00000598159 DSG3P32926 999 aa27.5■■□□□ 1.99
SSBP4-205ENST00000598159 MB21D1Q8N884 522 aa27.5■■□□□ 1.99
SSBP4-205ENST00000598159 CRISPLD2Q9H0B8 497 aa27.5■■□□□ 1.99
SSBP4-205ENST00000598159 EPB41L4AQ9HCS5 686 aaPredicted RBP27.5■■□□□ 1.99
SSBP4-205ENST00000598159 SLC15A5A6NIM6 579 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 WDR46O15213 610 aaKnown RBP27.49■■□□□ 1.99
SSBP4-205ENST00000598159 RASA1P20936 1047 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 PTPREP23469 700 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 PDE1AP54750 535 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 ATP2B2Q01814 1243 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 MAP2K5Q13163 448 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 WDR78Q5VTH9 848 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 SPICE1Q8N0Z3 855 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 EVI5LQ96CN4 794 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 SEC62Q99442 399 aaKnown RBP27.49■■□□□ 1.99
SSBP4-205ENST00000598159 HTATIP2Q9BUP3 242 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 GOPCQ9HD26 462 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 IVNS1ABPQ9Y6Y0 642 aa27.49■■□□□ 1.99
SSBP4-205ENST00000598159 ROBO3Q96MS0 1386 aa27.48■■□□□ 1.99
SSBP4-205ENST00000598159 FLOT1O75955 427 aa27.48■■□□□ 1.99
SSBP4-205ENST00000598159 FARP2O94887 1054 aaPredicted RBP27.48■■□□□ 1.99
SSBP4-205ENST00000598159 TRIM32Q13049 653 aa27.48■■□□□ 1.99
SSBP4-205ENST00000598159 ZNF444Q8N0Y2 327 aaPredicted RBP27.48■■□□□ 1.99
SSBP4-205ENST00000598159 STK11IPQ8N1F8 1099 aa27.48■■□□□ 1.99
SSBP4-205ENST00000598159 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.48■■□□□ 1.99
SSBP4-205ENST00000598159 ZKSCAN1P17029 563 aaPredicted RBP27.47■■□□□ 1.99
SSBP4-205ENST00000598159 MAP3K21Q5TCX8 1036 aa27.47■■□□□ 1.99
SSBP4-205ENST00000598159 DPF3Q92784 378 aa27.47■■□□□ 1.99
SSBP4-205ENST00000598159 APBA2Q99767 749 aa27.47■■□□□ 1.99
SSBP4-205ENST00000598159 NYAP2Q9P242 653 aa27.47■■□□□ 1.99
SSBP4-205ENST00000598159 RLFQ13129 1914 aa27.46■■□□□ 1.99
SSBP4-205ENST00000598159 STRNO43815 780 aa27.46■■□□□ 1.99
SSBP4-205ENST00000598159 TICAM2Q86XR7 235 aa27.46■■□□□ 1.99
SSBP4-205ENST00000598159 SHCBP1Q8NEM2 672 aa27.46■■□□□ 1.99
SSBP4-205ENST00000598159 SPATC1LQ9H0A9 340 aa27.46■■□□□ 1.99
SSBP4-205ENST00000598159 PRKAR2AP13861 404 aaKnown RBP27.45■■□□□ 1.98
SSBP4-205ENST00000598159 SMC5Q8IY18 1101 aa27.45■■□□□ 1.98
SSBP4-205ENST00000598159 MOV10L1Q9BXT6 1211 aaKnown RBP27.45■■□□□ 1.98
SSBP4-205ENST00000598159 NAPBQ9H115 298 aa27.45■■□□□ 1.98
SSBP4-205ENST00000598159 SLC3A2P08195 630 aaKnown RBP27.44■■□□□ 1.98
SSBP4-205ENST00000598159 GRB14Q14449 540 aa27.44■■□□□ 1.98
SSBP4-205ENST00000598159 ANKLE1Q8NAG6 615 aa27.44■■□□□ 1.98
SSBP4-205ENST00000598159 HOXC6P09630 235 aa27.43■■□□□ 1.98
SSBP4-205ENST00000598159 PDE4BQ07343 736 aa27.43■■□□□ 1.98
SSBP4-205ENST00000598159 CACNB2Q08289 660 aaPredicted RBP27.43■■□□□ 1.98
SSBP4-205ENST00000598159 CCL14Q16627 93 aa27.43■■□□□ 1.98
SSBP4-205ENST00000598159 ATG4CQ96DT6 458 aa27.43■■□□□ 1.98
SSBP4-205ENST00000598159 ADAMTS5Q9UNA0 930 aa27.43■■□□□ 1.98
SSBP4-205ENST00000598159 GREB1LQ9C091 1923 aaPredicted RBP27.42■■□□□ 1.98
SSBP4-205ENST00000598159 EXOC6Q8TAG9 804 aa27.42■■□□□ 1.98
SSBP4-205ENST00000598159 LNPKQ9C0E8 428 aa27.42■■□□□ 1.98
SSBP4-205ENST00000598159 MROH8Q9H579 483 aa27.42■■□□□ 1.98
SSBP4-205ENST00000598159 HELLSQ9NRZ9 838 aa27.42■■□□□ 1.98
SSBP4-205ENST00000598159 RAD21O60216 631 aa27.41■■□□□ 1.98
SSBP4-205ENST00000598159 ERCC3P19447 782 aa27.41■■□□□ 1.98
SSBP4-205ENST00000598159 PLS1Q14651 629 aa27.41■■□□□ 1.98
SSBP4-205ENST00000598159 MFSD14CQ5VZR4 134 aa27.41■■□□□ 1.98
SSBP4-205ENST00000598159 NECAB2Q7Z6G3 386 aa27.41■■□□□ 1.98
SSBP4-205ENST00000598159 MKL1Q969V6 931 aa27.41■■□□□ 1.98
SSBP4-205ENST00000598159 CLIP2Q9UDT6 1046 aa27.41■■□□□ 1.98
SSBP4-205ENST00000598159 IGKV6D-41A0A0C4DH26 115 aa27.4■■□□□ 1.98
SSBP4-205ENST00000598159 PRDM1O75626 825 aa27.4■■□□□ 1.98
SSBP4-205ENST00000598159 SLC34A2O95436 690 aa27.4■■□□□ 1.98
SSBP4-205ENST00000598159 IGHDP01880 384 aa27.4■■□□□ 1.98
SSBP4-205ENST00000598159 PPARAQ07869 468 aa27.4■■□□□ 1.98
SSBP4-205ENST00000598159 SAMD1Q6SPF0 538 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-205ENST00000598159 DPP9Q86TI2 863 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms