RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 TBC1D8O95759 1140 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 HSPA8P11142 646 aaKnown RBP23.98■■□□□ 1.43
PNKP-211ENST00000598020 VCAM1P19320 739 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 ATP2B2Q01814 1243 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 ZYXQ15942 572 aaKnown RBP23.98■■□□□ 1.43
PNKP-211ENST00000598020 TSGA10IPQ3SY00 556 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 CCDC178Q5BJE1 867 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 STOX1Q6ZVD7 989 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 KCNB2Q92953 911 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 PARK7Q99497 189 aaKnown RBP23.98■■□□□ 1.43
PNKP-211ENST00000598020 GOPCQ9HD26 462 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 ZSWIM5Q9P217 1185 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 PNMA3Q9UL41 463 aa23.98■■□□□ 1.43
PNKP-211ENST00000598020 TLR2O60603 784 aa23.97■■□□□ 1.43
PNKP-211ENST00000598020 EIF5BO60841 1220 aaKnown RBP23.97■■□□□ 1.43
PNKP-211ENST00000598020 KIAA1755Q5JYT7 1200 aa23.97■■□□□ 1.43
PNKP-211ENST00000598020 IQCA1Q86XH1 822 aa23.97■■□□□ 1.43
PNKP-211ENST00000598020 NCOA7Q8NI08 942 aa23.97■■□□□ 1.43
PNKP-211ENST00000598020 R3HDMLQ9H3Y0 253 aa23.97■■□□□ 1.43
PNKP-211ENST00000598020 ADGRA2Q96PE1 1338 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L15C9J2P7 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L13C9JLJ4 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L11C9JVI0 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L18D6R9N7 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L22D6RA61 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L17D6RBQ6 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L19D6RCP7 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L20D6RJB6 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 OSBPP22059 807 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 USP17L24Q0WX57 530 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 DGKHQ86XP1 1220 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 GMCL1P1Q8NEA9 526 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 ANKS1AQ92625 1134 aa23.96■■□□□ 1.43
PNKP-211ENST00000598020 F5H6K3 240 aa23.95■■□□□ 1.42
PNKP-211ENST00000598020 WDR46O15213 610 aaKnown RBP23.95■■□□□ 1.42
PNKP-211ENST00000598020 HSPA4P34932 840 aa23.95■■□□□ 1.42
PNKP-211ENST00000598020 KLRC3Q07444 240 aa23.95■■□□□ 1.42
PNKP-211ENST00000598020 RCSD1Q6JBY9 416 aa23.95■■□□□ 1.42
PNKP-211ENST00000598020 CATSPERGQ6ZRH7 1159 aa23.95■■□□□ 1.42
PNKP-211ENST00000598020 ASCC2Q9H1I8 757 aaPredicted RBP23.95■■□□□ 1.42
PNKP-211ENST00000598020 TSKSQ9UJT2 592 aa23.95■■□□□ 1.42
PNKP-211ENST00000598020 STX8Q9UNK0 236 aa23.95■■□□□ 1.42
PNKP-211ENST00000598020 CYP2C8P10632 490 aa23.94■■□□□ 1.42
PNKP-211ENST00000598020 TOP1P11387 765 aaKnown RBP23.94■■□□□ 1.42
PNKP-211ENST00000598020 RALYLQ86SE5 291 aaKnown RBP23.94■■□□□ 1.42
PNKP-211ENST00000598020 ZSCAN10Q96SZ4 725 aaPredicted RBP23.94■■□□□ 1.42
PNKP-211ENST00000598020 USP26Q9BXU7 913 aa23.94■■□□□ 1.42
PNKP-211ENST00000598020 RPAP3Q9H6T3 665 aaPredicted RBP23.94■■□□□ 1.42
PNKP-211ENST00000598020 GPR25O00155 361 aa23.93■■□□□ 1.42
PNKP-211ENST00000598020 NDUFB10O96000 172 aa23.93■■□□□ 1.42
PNKP-211ENST00000598020 ZKSCAN1P17029 563 aaPredicted RBP23.93■■□□□ 1.42
PNKP-211ENST00000598020 IRX3P78415 501 aaPredicted RBP23.93■■□□□ 1.42
PNKP-211ENST00000598020 C17orf99Q6UX52 265 aa23.93■■□□□ 1.42
PNKP-211ENST00000598020 CYB5R4Q7L1T6 521 aa23.93■■□□□ 1.42
PNKP-211ENST00000598020 MB21D2Q8IYB1 491 aaPredicted RBP23.93■■□□□ 1.42
PNKP-211ENST00000598020 MTA3Q9BTC8 594 aa23.93■■□□□ 1.42
PNKP-211ENST00000598020 GCLCP48506 637 aaPredicted RBP23.92■■□□□ 1.42
PNKP-211ENST00000598020 LBX1P52954 281 aa23.92■■□□□ 1.42
PNKP-211ENST00000598020 KRT32Q14532 448 aa23.92■■□□□ 1.42
PNKP-211ENST00000598020 RASEFQ8IZ41 740 aa23.92■■□□□ 1.42
PNKP-211ENST00000598020 SPICE1Q8N0Z3 855 aa23.92■■□□□ 1.42
PNKP-211ENST00000598020 LRRC47Q8N1G4 583 aaKnown RBP23.92■■□□□ 1.42
PNKP-211ENST00000598020 P2RX7Q99572 595 aaKnown RBP23.92■■□□□ 1.42
PNKP-211ENST00000598020 TMEM47Q9BQJ4 181 aa23.92■■□□□ 1.42
PNKP-211ENST00000598020 BCRP11274 1271 aa23.91■■□□□ 1.42
PNKP-211ENST00000598020 LBX2Q6XYB7 198 aa23.91■■□□□ 1.42
PNKP-211ENST00000598020 ENAHQ8N8S7 591 aaPredicted RBP23.91■■□□□ 1.42
PNKP-211ENST00000598020 SMCR8Q8TEV9 937 aaPredicted RBP23.91■■□□□ 1.42
PNKP-211ENST00000598020 GTF3C2Q8WUA4 911 aaPredicted RBP23.91■■□□□ 1.42
PNKP-211ENST00000598020 GMCL1Q96IK5 515 aa23.91■■□□□ 1.42
PNKP-211ENST00000598020 ZKSCAN3Q9BRR0 538 aa23.91■■□□□ 1.42
PNKP-211ENST00000598020 UBAC1Q9BSL1 405 aa23.91■■□□□ 1.42
PNKP-211ENST00000598020 PRDM10Q9NQV6 1147 aa23.91■■□□□ 1.42
PNKP-211ENST00000598020 TNKSO95271 1327 aa23.9■■□□□ 1.42
PNKP-211ENST00000598020 COG2Q14746 738 aa23.9■■□□□ 1.42
PNKP-211ENST00000598020 SEC23AQ15436 765 aa23.9■■□□□ 1.42
PNKP-211ENST00000598020 SLFN13Q68D06 897 aa23.9■■□□□ 1.42
PNKP-211ENST00000598020 HOXC10Q9NYD6 342 aa23.9■■□□□ 1.42
PNKP-211ENST00000598020 RLFQ13129 1914 aa23.9■■□□□ 1.42
PNKP-211ENST00000598020 MYPNQ86TC9 1320 aa23.89■■□□□ 1.42
PNKP-211ENST00000598020 ANTXR2P58335 489 aa23.89■■□□□ 1.41
PNKP-211ENST00000598020 HERVK_113P62684 666 aa23.89■■□□□ 1.41
PNKP-211ENST00000598020 C8orf34Q49A92 452 aa23.89■■□□□ 1.41
PNKP-211ENST00000598020 ZNF296Q8WUU4 475 aaPredicted RBP23.89■■□□□ 1.41
PNKP-211ENST00000598020 TANGO6Q9C0B7 1094 aa23.89■■□□□ 1.41
PNKP-211ENST00000598020 FKTNO75072 461 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 MCM5P33992 734 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 FAM83BQ5T0W9 1011 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 NEK1Q96PY6 1258 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 CPA4Q9UI42 421 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 SNX14Q9Y5W7 946 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 CASP8AP2Q9UKL3 1982 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 PARP14Q460N5 1801 aa23.88■■□□□ 1.41
PNKP-211ENST00000598020 RAD21O60216 631 aa23.87■■□□□ 1.41
PNKP-211ENST00000598020 SP3Q02447 781 aa23.87■■□□□ 1.41
PNKP-211ENST00000598020 SART3Q15020 963 aaKnown RBP23.87■■□□□ 1.41
PNKP-211ENST00000598020 DCAF4Q8WV16 495 aa23.87■■□□□ 1.41
PNKP-211ENST00000598020 MORF4L1Q9UBU8 362 aa23.87■■□□□ 1.41
PNKP-211ENST00000598020 WDR19Q8NEZ3 1342 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 SPDYE16A6NNV3 312 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms