RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 ZNF213O14771 459 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 RAD21O60216 631 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 AKNAD1Q5T1N1 836 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 CATSPERGQ6ZRH7 1159 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 CHMP4CQ96CF2 233 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 ORC4O43929 436 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 HERVK_113P62684 666 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 PABPC4Q13310 644 aaKnown RBP eCLIP18.22■□□□□ 0.51
USE1-206ENST00000595101 STAG1Q8WVM7 1258 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 NYAP2Q9P242 653 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 MYH8P13535 1937 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L15C9J2P7 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L13C9JLJ4 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L11C9JVI0 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L18D6R9N7 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L22D6RA61 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L17D6RBQ6 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L19D6RCP7 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L20D6RJB6 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 USP17L24Q0WX57 530 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 Q3C1V9 767 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
USE1-206ENST00000595101 ERO1AQ96HE7 468 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 TRIM47Q96LD4 638 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
USE1-206ENST00000595101 ESYT1Q9BSJ8 1104 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 RBPJLQ9UBG7 517 aa18.22■□□□□ 0.51
USE1-206ENST00000595101 GREB1LQ9C091 1923 aaPredicted RBP18.21■□□□□ 0.51
USE1-206ENST00000595101 ZSWIM8A7E2V4 1837 aa18.21■□□□□ 0.51
USE1-206ENST00000595101 PLIN4Q96Q06 1357 aa18.21■□□□□ 0.51
USE1-206ENST00000595101 MFSD6Q6ZSS7 791 aa18.21■□□□□ 0.51
USE1-206ENST00000595101 EFCC1Q9HA90 598 aa18.21■□□□□ 0.51
USE1-206ENST00000595101 PSMC4P43686 418 aa18.2■□□□□ 0.5
USE1-206ENST00000595101 RASGRP2Q7LDG7 609 aa18.2■□□□□ 0.5
USE1-206ENST00000595101 F5H6K3 240 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 CNMDO75829 334 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 TTLL1O95922 423 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 CYP21A2P08686 494 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 KLRC3Q07444 240 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 IMMTQ16891 758 aaKnown RBP18.19■□□□□ 0.5
USE1-206ENST00000595101 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
USE1-206ENST00000595101 MAP4K1Q92918 833 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 MKL1Q969V6 931 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 ZKSCAN3Q9BRR0 538 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 PAGR1Q9BTK6 254 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 LSG1Q9H089 658 aaKnown RBP18.19■□□□□ 0.5
USE1-206ENST00000595101 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 STX8Q9UNK0 236 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
USE1-206ENST00000595101 NDUFB10O96000 172 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 LPAR1Q92633 364 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
USE1-206ENST00000595101 B4E1Z4 1266 aa18.18■□□□□ 0.5
USE1-206ENST00000595101 FAM110CQ1W6H9 321 aa18.18■□□□□ 0.5
USE1-206ENST00000595101 ABHD8Q96I13 439 aa18.18■□□□□ 0.5
USE1-206ENST00000595101 GOPCQ9HD26 462 aa18.18■□□□□ 0.5
USE1-206ENST00000595101 BTBD7Q9P203 1132 aa18.18■□□□□ 0.5
USE1-206ENST00000595101 KDM4AO75164 1064 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 FMNL1O95466 1100 aaPredicted RBP18.17■□□□□ 0.5
USE1-206ENST00000595101 GCLCP48506 637 aaPredicted RBP18.17■□□□□ 0.5
USE1-206ENST00000595101 RBM8AQ9Y5S9 174 aaKnown RBP18.17■□□□□ 0.5
USE1-206ENST00000595101 WDR46O15213 610 aaKnown RBP18.17■□□□□ 0.5
USE1-206ENST00000595101 CDC45O75419 566 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 FLOT1O75955 427 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 COL9A3Q14050 684 aaPredicted RBP18.17■□□□□ 0.5
USE1-206ENST00000595101 COG2Q14746 738 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 KIF22Q14807 665 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 RCSD1Q6JBY9 416 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 ATG4CQ96DT6 458 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 RNF41Q9H4P4 317 aaPredicted RBP18.17■□□□□ 0.5
USE1-206ENST00000595101 MORF4L1Q9UBU8 362 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 GABRQQ9UN88 632 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 MTMR7Q9Y216 660 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 PTPN22Q9Y2R2 807 aa18.17■□□□□ 0.5
USE1-206ENST00000595101 NOVP48745 357 aa18.16■□□□□ 0.5
USE1-206ENST00000595101 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
USE1-206ENST00000595101 PORCNQ9H237 461 aa18.16■□□□□ 0.5
USE1-206ENST00000595101 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
USE1-206ENST00000595101 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
USE1-206ENST00000595101 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
USE1-206ENST00000595101 DSG3P32926 999 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 ERVK-9P63128 1117 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 ERVK-24P63145 666 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 GPRC5AQ8NFJ5 357 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 ESR2Q92731 530 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 TCP11L1Q9NUJ3 509 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 HPS5Q9UPZ3 1129 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 PTCH2Q9Y6C5 1203 aa18.15■□□□□ 0.5
USE1-206ENST00000595101 CAPN15O75808 1086 aa18.14■□□□□ 0.5
USE1-206ENST00000595101 MCCP23508 829 aa18.14■□□□□ 0.5
USE1-206ENST00000595101 PRKCZQ05513 592 aa18.14■□□□□ 0.5
USE1-206ENST00000595101 SLFN13Q68D06 897 aa18.14■□□□□ 0.5
USE1-206ENST00000595101 FBXO46Q6PJ61 603 aaPredicted RBP18.14■□□□□ 0.5
USE1-206ENST00000595101 LBX2Q6XYB7 198 aa18.14■□□□□ 0.5
USE1-206ENST00000595101 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms