RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 HDAC1Q13547 482 aaPredicted RBP28.12■■■□□ 2.09
LSM4-204ENST00000594828 TRIB2Q92519 343 aa28.12■■■□□ 2.09
LSM4-204ENST00000594828 LPAR1Q92633 364 aa28.12■■■□□ 2.09
LSM4-204ENST00000594828 GCC1Q96CN9 775 aa28.12■■■□□ 2.09
LSM4-204ENST00000594828 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.12■■■□□ 2.091e-7■■■□□ 17.2
LSM4-204ENST00000594828 KANSL2Q9H9L4 492 aa28.12■■■□□ 2.09
LSM4-204ENST00000594828 BTBD7Q9P203 1132 aa28.12■■■□□ 2.09
LSM4-204ENST00000594828 PLXNB2O15031 1838 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 MINDY4BA8MYZ0 360 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 M0R2C6 588 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 RGS2P41220 211 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 TRIM32Q13049 653 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 KIAA1755Q5JYT7 1200 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 MORN1Q5T089 497 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 UBE2Q1Q7Z7E8 422 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 TRMT44Q8IYL2 757 aaKnown RBP28.11■■■□□ 2.09
LSM4-204ENST00000594828 USP6NLQ92738 828 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 FSD1Q9BTV5 496 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 HMX1Q9NP08 348 aaPredicted RBP28.11■■■□□ 2.09
LSM4-204ENST00000594828 RPTORQ8N122 1335 aa28.11■■■□□ 2.09
LSM4-204ENST00000594828 FARP2O94887 1054 aaPredicted RBP28.1■■■□□ 2.09
LSM4-204ENST00000594828 APPP05067 770 aa28.1■■■□□ 2.09
LSM4-204ENST00000594828 ATP2B2Q01814 1243 aa28.1■■■□□ 2.09
LSM4-204ENST00000594828 WDR78Q5VTH9 848 aa28.1■■■□□ 2.09
LSM4-204ENST00000594828 VCPKMTQ9H867 229 aa28.1■■■□□ 2.09
LSM4-204ENST00000594828 PATL2C9JE40 543 aaKnown RBP28.09■■■□□ 2.09
LSM4-204ENST00000594828 EEF2P13639 858 aaKnown RBP28.09■■■□□ 2.09
LSM4-204ENST00000594828 AAMPQ13685 434 aa28.09■■■□□ 2.09
LSM4-204ENST00000594828 SPICE1Q8N0Z3 855 aa28.09■■■□□ 2.09
LSM4-204ENST00000594828 STK11IPQ8N1F8 1099 aa28.09■■■□□ 2.09
LSM4-204ENST00000594828 DPF3Q92784 378 aa28.09■■■□□ 2.09
LSM4-204ENST00000594828 MKNK2Q9HBH9 465 aa28.09■■■□□ 2.09
LSM4-204ENST00000594828 TDO2P48775 406 aa28.08■■■□□ 2.09
LSM4-204ENST00000594828 SEC62Q99442 399 aaKnown RBP28.08■■■□□ 2.09
LSM4-204ENST00000594828 HTATIP2Q9BUP3 242 aa28.08■■■□□ 2.09
LSM4-204ENST00000594828 CRISPLD2Q9H0B8 497 aa28.08■■■□□ 2.09
LSM4-204ENST00000594828 EPB41L4AQ9HCS5 686 aaPredicted RBP28.08■■■□□ 2.09
LSM4-204ENST00000594828 SALL3Q9BXA9 1300 aa28.08■■■□□ 2.09
LSM4-204ENST00000594828 ZKSCAN1P17029 563 aaPredicted RBP28.07■■■□□ 2.08
LSM4-204ENST00000594828 MAP2K5Q13163 448 aa28.07■■■□□ 2.08
LSM4-204ENST00000594828 SLC15A5A6NIM6 579 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 WDR46O15213 610 aaKnown RBP28.06■■■□□ 2.08
LSM4-204ENST00000594828 FLOT1O75955 427 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 PTPREP23469 700 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 DSG3P32926 999 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 ZMYM1Q5SVZ6 1142 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 IFNL3Q8IZI9 196 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 APBA2Q99767 749 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 NACAP1Q9BZK3 213 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 IVNS1ABPQ9Y6Y0 642 aa28.06■■■□□ 2.08
LSM4-204ENST00000594828 PRKAR2AP13861 404 aaKnown RBP28.05■■■□□ 2.08
LSM4-204ENST00000594828 RASA1P20936 1047 aa28.05■■■□□ 2.08
LSM4-204ENST00000594828 CCL14Q16627 93 aa28.05■■■□□ 2.08
LSM4-204ENST00000594828 MAP3K21Q5TCX8 1036 aa28.05■■■□□ 2.08
LSM4-204ENST00000594828 MB21D1Q8N884 522 aa28.05■■■□□ 2.08
LSM4-204ENST00000594828 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.05■■■□□ 2.08
LSM4-204ENST00000594828 STAP2Q9UGK3 403 aa28.05■■■□□ 2.08
LSM4-204ENST00000594828 ROBO3Q96MS0 1386 aa28.04■■■□□ 2.08
LSM4-204ENST00000594828 SLC34A2O95436 690 aa28.04■■■□□ 2.08
LSM4-204ENST00000594828 MOV10L1Q9BXT6 1211 aaKnown RBP28.04■■■□□ 2.08
LSM4-204ENST00000594828 SPATC1LQ9H0A9 340 aa28.04■■■□□ 2.08
LSM4-204ENST00000594828 ZNF287Q9HBT7 754 aa28.04■■■□□ 2.08
LSM4-204ENST00000594828 GOPCQ9HD26 462 aa28.04■■■□□ 2.08
LSM4-204ENST00000594828 PDE1AP54750 535 aa28.03■■■□□ 2.08
LSM4-204ENST00000594828 CACNB2Q08289 660 aaPredicted RBP28.03■■■□□ 2.08
LSM4-204ENST00000594828 ZNF444Q8N0Y2 327 aaPredicted RBP28.03■■■□□ 2.08
LSM4-204ENST00000594828 H0YGN5 161 aa28.02■■■□□ 2.08
LSM4-204ENST00000594828 RAD21O60216 631 aa28.02■■■□□ 2.08
LSM4-204ENST00000594828 GRB14Q14449 540 aa28.02■■■□□ 2.08
LSM4-204ENST00000594828 SAMD1Q6SPF0 538 aaPredicted RBP28.02■■■□□ 2.08
LSM4-204ENST00000594828 EVI5LQ96CN4 794 aa28.02■■■□□ 2.08
LSM4-204ENST00000594828 ATG4CQ96DT6 458 aa28.02■■■□□ 2.08
LSM4-204ENST00000594828 RWDD1Q9H446 243 aaPredicted RBP28.02■■■□□ 2.08
LSM4-204ENST00000594828 PLS1Q14651 629 aa28.01■■■□□ 2.07
LSM4-204ENST00000594828 ANKLE1Q8NAG6 615 aa28.01■■■□□ 2.07
LSM4-204ENST00000594828 SHCBP1Q8NEM2 672 aa28.01■■■□□ 2.07
LSM4-204ENST00000594828 PAWRQ96IZ0 340 aaKnown RBP28.01■■■□□ 2.07
LSM4-204ENST00000594828 NAPBQ9H115 298 aa28.01■■■□□ 2.07
LSM4-204ENST00000594828 NYAP2Q9P242 653 aa28.01■■■□□ 2.07
LSM4-204ENST00000594828 STRNO43815 780 aa28■■■□□ 2.07
LSM4-204ENST00000594828 PRDM1O75626 825 aa28■■■□□ 2.07
LSM4-204ENST00000594828 HOXC6P09630 235 aa28■■■□□ 2.07
LSM4-204ENST00000594828 ERCC3P19447 782 aa28■■■□□ 2.07
LSM4-204ENST00000594828 RLFQ13129 1914 aa28■■■□□ 2.07
LSM4-204ENST00000594828 MFSD14CQ5VZR4 134 aa27.99■■■□□ 2.07
LSM4-204ENST00000594828 NECAB2Q7Z6G3 386 aa27.99■■■□□ 2.07
LSM4-204ENST00000594828 SLC3A2P08195 630 aaKnown RBP27.98■■■□□ 2.07
LSM4-204ENST00000594828 PDE4BQ07343 736 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 FAM83BQ5T0W9 1011 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 DPP9Q86TI2 863 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 LNPKQ9C0E8 428 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 MROH8Q9H579 483 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 FBXO28Q9NVF7 368 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 FLRT1Q9NZU1 646 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 OGDHLQ9ULD0 1010 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 ADAMTS5Q9UNA0 930 aa27.98■■■□□ 2.07
LSM4-204ENST00000594828 CCND3P30281 292 aaPredicted RBP27.97■■■□□ 2.07
LSM4-204ENST00000594828 HABP4Q5JVS0 413 aaKnown RBP27.97■■■□□ 2.07
LSM4-204ENST00000594828 CCDC129Q6ZRS4 1044 aa27.97■■■□□ 2.07
LSM4-204ENST00000594828 NCAPG2Q86XI2 1143 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms