RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 KIF22Q14807 665 aa26■■□□□ 1.75
HOMER3-206ENST00000594439 ANKRD13CQ8N6S4 541 aa26■■□□□ 1.75
HOMER3-206ENST00000594439 CEP95Q96GE4 821 aa26■■□□□ 1.75
HOMER3-206ENST00000594439 ABHD8Q96I13 439 aa26■■□□□ 1.75
HOMER3-206ENST00000594439 RPAP3Q9H6T3 665 aaPredicted RBP26■■□□□ 1.75
HOMER3-206ENST00000594439 SGSM2O43147 1006 aa25.99■■□□□ 1.75
HOMER3-206ENST00000594439 FAM110CQ1W6H9 321 aa25.99■■□□□ 1.75
HOMER3-206ENST00000594439 TBC1D10CQ8IV04 446 aa25.99■■□□□ 1.75
HOMER3-206ENST00000594439 LPAR1Q92633 364 aa25.99■■□□□ 1.75
HOMER3-206ENST00000594439 MTMR4Q9NYA4 1195 aa25.99■■□□□ 1.75
HOMER3-206ENST00000594439 RLFQ13129 1914 aa25.98■■□□□ 1.75
HOMER3-206ENST00000594439 ARHGEF6Q15052 776 aa25.98■■□□□ 1.75
HOMER3-206ENST00000594439 FBXO46Q6PJ61 603 aaPredicted RBP25.98■■□□□ 1.75
HOMER3-206ENST00000594439 POTEEQ6S8J3 1075 aa25.98■■□□□ 1.75
HOMER3-206ENST00000594439 TRIM47Q96LD4 638 aa25.98■■□□□ 1.75
HOMER3-206ENST00000594439 MORF4L1Q9UBU8 362 aa25.98■■□□□ 1.75
HOMER3-206ENST00000594439 ECM2O94769 699 aaPredicted RBP25.97■■□□□ 1.75
HOMER3-206ENST00000594439 PSMC4P43686 418 aa25.97■■□□□ 1.75
HOMER3-206ENST00000594439 AKNAD1Q5T1N1 836 aa25.97■■□□□ 1.75
HOMER3-206ENST00000594439 SPICE1Q8N0Z3 855 aa25.97■■□□□ 1.75
HOMER3-206ENST00000594439 STAG1Q8WVM7 1258 aa25.97■■□□□ 1.75
HOMER3-206ENST00000594439 MKL1Q969V6 931 aa25.97■■□□□ 1.75
HOMER3-206ENST00000594439 CLIP2Q9UDT6 1046 aa25.97■■□□□ 1.75
HOMER3-206ENST00000594439 CTNNA3Q9UI47 895 aa25.97■■□□□ 1.75
HOMER3-206ENST00000594439 PARP14Q460N5 1801 aa25.96■■□□□ 1.75
HOMER3-206ENST00000594439 TSPY2A6NKD2 308 aa25.96■■□□□ 1.75
HOMER3-206ENST00000594439 ZNF213O14771 459 aa25.96■■□□□ 1.75
HOMER3-206ENST00000594439 RANBP6O60518 1105 aaKnown RBP25.96■■□□□ 1.75
HOMER3-206ENST00000594439 GTF3C2Q8WUA4 911 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-206ENST00000594439 GOPCQ9HD26 462 aa25.96■■□□□ 1.75
HOMER3-206ENST00000594439 TXNRD2Q9NNW7 524 aa25.96■■□□□ 1.75
HOMER3-206ENST00000594439 RBPJLQ9UBG7 517 aa25.96■■□□□ 1.75
HOMER3-206ENST00000594439 PTPN22Q9Y2R2 807 aa25.96■■□□□ 1.75
HOMER3-206ENST00000594439 WDR46O15213 610 aaKnown RBP25.95■■□□□ 1.74
HOMER3-206ENST00000594439 PEX10O60683 326 aa25.95■■□□□ 1.74
HOMER3-206ENST00000594439 TTLL1O95922 423 aa25.95■■□□□ 1.74
HOMER3-206ENST00000594439 PCP11498 1178 aaKnown RBP25.95■■□□□ 1.74
HOMER3-206ENST00000594439 PTH1RQ03431 593 aa25.95■■□□□ 1.74
HOMER3-206ENST00000594439 MFSD6Q6ZSS7 791 aa25.95■■□□□ 1.74
HOMER3-206ENST00000594439 IL17RBQ9NRM6 502 aa25.95■■□□□ 1.74
HOMER3-206ENST00000594439 TOMM22Q9NS69 142 aa25.95■■□□□ 1.74
HOMER3-206ENST00000594439 SPDYE16A6NNV3 312 aaPredicted RBP25.94■■□□□ 1.74
HOMER3-206ENST00000594439 FMNL1O95466 1100 aaPredicted RBP25.94■■□□□ 1.74
HOMER3-206ENST00000594439 GNRH1P01148 92 aa25.94■■□□□ 1.74
HOMER3-206ENST00000594439 FCGRTP55899 365 aa25.94■■□□□ 1.74
HOMER3-206ENST00000594439 RRP12Q5JTH9 1297 aaKnown RBP25.94■■□□□ 1.74
HOMER3-206ENST00000594439 LBX2Q6XYB7 198 aa25.94■■□□□ 1.74
HOMER3-206ENST00000594439 NKX2-3Q8TAU0 364 aa25.94■■□□□ 1.74
HOMER3-206ENST00000594439 TANGO6Q9C0B7 1094 aa25.94■■□□□ 1.74
HOMER3-206ENST00000594439 RNF41Q9H4P4 317 aaPredicted RBP25.94■■□□□ 1.74
HOMER3-206ENST00000594439 SYNPO2Q9UMS6 1093 aa25.94■■□□□ 1.74
HOMER3-206ENST00000594439 HPS5Q9UPZ3 1129 aa25.94■■□□□ 1.74
HOMER3-206ENST00000594439 NMT2O60551 498 aa25.93■■□□□ 1.74
HOMER3-206ENST00000594439 COG2Q14746 738 aa25.93■■□□□ 1.74
HOMER3-206ENST00000594439 IMMTQ16891 758 aaKnown RBP25.93■■□□□ 1.74
HOMER3-206ENST00000594439 NEDD4P46934 1319 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 DOCK3Q8IZD9 2030 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 A0A0G2JMZ2 1700 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 F5H6K3 240 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 CNMDO75829 334 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 NDUFB10O96000 172 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 NOVP48745 357 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 KLRC3Q07444 240 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 LRRC47Q8N1G4 583 aaKnown RBP25.92■■□□□ 1.74
HOMER3-206ENST00000594439 GPRC5AQ8NFJ5 357 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 ESYT1Q9BSJ8 1104 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 RABGAP1Q9Y3P9 1069 aa25.92■■□□□ 1.74
HOMER3-206ENST00000594439 RAD21O60216 631 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 PRMT2P55345 433 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 ERVK-9P63128 1117 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 ERVK-24P63145 666 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 Q3C1V9 767 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 PPP4R3BQ5MIZ7 849 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 PAGR1Q9BTK6 254 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 TCP11L1Q9NUJ3 509 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 HOXC10Q9NYD6 342 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 SRRDQ9UH36 339 aa25.91■■□□□ 1.74
HOMER3-206ENST00000594439 DSG3P32926 999 aa25.9■■□□□ 1.74
HOMER3-206ENST00000594439 FAM83BQ5T0W9 1011 aa25.9■■□□□ 1.74
HOMER3-206ENST00000594439 IFFO2Q5TF58 517 aa25.9■■□□□ 1.74
HOMER3-206ENST00000594439 GMCL1P1Q8NEA9 526 aa25.9■■□□□ 1.74
HOMER3-206ENST00000594439 PTCH2Q9Y6C5 1203 aa25.9■■□□□ 1.74
HOMER3-206ENST00000594439 U3KPZ7 1027 aaPredicted RBP25.9■■□□□ 1.74
HOMER3-206ENST00000594439 FLOT1O75955 427 aa25.89■■□□□ 1.74
HOMER3-206ENST00000594439 HOXD10P28358 340 aa25.89■■□□□ 1.74
HOMER3-206ENST00000594439 MAP4K1Q92918 833 aa25.89■■□□□ 1.74
HOMER3-206ENST00000594439 NUP88Q99567 741 aaPredicted RBP25.89■■□□□ 1.74
HOMER3-206ENST00000594439 BTBD7Q9P203 1132 aa25.89■■□□□ 1.74
HOMER3-206ENST00000594439 STX8Q9UNK0 236 aa25.89■■□□□ 1.74
HOMER3-206ENST00000594439 MYPNQ86TC9 1320 aa25.88■■□□□ 1.73
HOMER3-206ENST00000594439 TNPO2O14787 897 aaKnown RBP25.88■■□□□ 1.73
HOMER3-206ENST00000594439 NT5C2P49902 561 aa25.88■■□□□ 1.73
HOMER3-206ENST00000594439 ESR2Q92731 530 aa25.88■■□□□ 1.73
HOMER3-206ENST00000594439 LSG1Q9H089 658 aaKnown RBP25.88■■□□□ 1.73
HOMER3-206ENST00000594439 FBXO28Q9NVF7 368 aa25.88■■□□□ 1.73
HOMER3-206ENST00000594439 CDC45O75419 566 aa25.87■■□□□ 1.73
HOMER3-206ENST00000594439 CYP21A2P08686 494 aa25.87■■□□□ 1.73
HOMER3-206ENST00000594439 PRKCZQ05513 592 aa25.87■■□□□ 1.73
HOMER3-206ENST00000594439 SLFN13Q68D06 897 aa25.87■■□□□ 1.73
HOMER3-206ENST00000594439 ATG4CQ96DT6 458 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms