RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 APBA2Q99767 749 aa8.99□□□□□ -0.97
VMP1-215ENST00000592619 TP53P04637 393 aaPredicted RBP8.98□□□□□ -0.97
VMP1-215ENST00000592619 EPHX1P07099 455 aa8.98□□□□□ -0.97
VMP1-215ENST00000592619 SPATA31C1P0DKV0 1188 aa8.98□□□□□ -0.97
VMP1-215ENST00000592619 GRIK4Q16099 956 aa8.98□□□□□ -0.97
VMP1-215ENST00000592619 TKFCQ3LXA3 575 aa8.98□□□□□ -0.97
VMP1-215ENST00000592619 AXDND1Q5T1B0 1012 aaPredicted RBP8.98□□□□□ -0.97
VMP1-215ENST00000592619 HEATR6Q6AI08 1181 aaKnown RBP8.98□□□□□ -0.97
VMP1-215ENST00000592619 DNAJB8Q8NHS0 232 aa8.98□□□□□ -0.97
VMP1-215ENST00000592619 VWCEQ96DN2 955 aa8.98□□□□□ -0.97
VMP1-215ENST00000592619 KLHL25Q9H0H3 589 aa8.98□□□□□ -0.97
VMP1-215ENST00000592619 CWC22Q9HCG8 908 aaKnown RBP8.98□□□□□ -0.97
VMP1-215ENST00000592619 NOP58Q9Y2X3 529 aaKnown RBP8.98□□□□□ -0.97
VMP1-215ENST00000592619 COL17A1Q9UMD9 1497 aaPredicted RBP8.97□□□□□ -0.97
VMP1-215ENST00000592619 CBFA2T2O43439 604 aa8.97□□□□□ -0.97
VMP1-215ENST00000592619 ASMTLO95671 621 aa8.97□□□□□ -0.97
VMP1-215ENST00000592619 PREPP48147 710 aa8.97□□□□□ -0.97
VMP1-215ENST00000592619 SV2CQ496J9 727 aa8.97□□□□□ -0.97
VMP1-215ENST00000592619 NBPF12Q5TAG4 269 aaPredicted RBP8.97□□□□□ -0.97
VMP1-215ENST00000592619 TDRD10Q5VZ19 366 aaKnown RBP8.97□□□□□ -0.97
VMP1-215ENST00000592619 CCDC144CPQ8IYA2 1237 aa8.97□□□□□ -0.97
VMP1-215ENST00000592619 BEND7Q8N7W2 519 aaPredicted RBP8.97□□□□□ -0.97
VMP1-215ENST00000592619 PSMG3-AS1Q96PY0 264 aa8.97□□□□□ -0.97
VMP1-215ENST00000592619 PLAAQ9Y263 795 aa8.97□□□□□ -0.97
VMP1-215ENST00000592619 hCG_2014768A0A024R1R8 64 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 A0A1W2PQU0 124 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 KRBA1A5PL33 1030 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 SART1O43290 800 aaKnown RBP8.96□□□□□ -0.98
VMP1-215ENST00000592619 ALX3O95076 343 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 USP11P51784 963 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 RNF4P78317 190 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 IGBP1P78318 339 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 NRG1Q02297 640 aaPredicted RBP8.96□□□□□ -0.98
VMP1-215ENST00000592619 ZNF513Q8N8E2 541 aaPredicted RBP8.96□□□□□ -0.98
VMP1-215ENST00000592619 EZH1Q92800 747 aaPredicted RBP8.96□□□□□ -0.98
VMP1-215ENST00000592619 FAM46AQ96IP4 442 aaKnown RBP8.96□□□□□ -0.98
VMP1-215ENST00000592619 COL4A3BPQ9Y5P4 624 aa8.96□□□□□ -0.98
VMP1-215ENST00000592619 C9orf172C9J069 976 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 HSP90AA2PQ14568 343 aaPredicted RBP8.95□□□□□ -0.98
VMP1-215ENST00000592619 DALRD3Q5D0E6 543 aaKnown RBP8.95□□□□□ -0.98
VMP1-215ENST00000592619 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 LETMD1Q6P1Q0 360 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 PODNQ7Z5L7 613 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 XAGE3Q8WTP9 111 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 KREMEN1Q96MU8 473 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 NACC1Q96RE7 527 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 YIPF2Q9BWQ6 316 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 SEMA6CQ9H3T2 930 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 PCDH12Q9NPG4 1184 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 ARHGEF4Q9NR80 690 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 FAM86C1Q9NVL1 165 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 USP21Q9UK80 565 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 ADAMTS8Q9UP79 889 aa8.95□□□□□ -0.98
VMP1-215ENST00000592619 RNF225M0QZC1 329 aaPredicted RBP8.94□□□□□ -0.98
VMP1-215ENST00000592619 GAS2O43903 313 aaKnown RBP8.94□□□□□ -0.98
VMP1-215ENST00000592619 CAPNS1P04632 268 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 ETV3P41162 512 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 MASP1P48740 699 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 UVSSAQ2YD98 709 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 GPAT2Q6NUI2 795 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.94□□□□□ -0.98
VMP1-215ENST00000592619 C7orf61Q8IZ16 206 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 KISS1RQ969F8 398 aaPredicted RBP8.94□□□□□ -0.98
VMP1-215ENST00000592619 FBXL18Q96ME1 805 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 WHRNQ9P202 907 aa8.94□□□□□ -0.98
VMP1-215ENST00000592619 A0A087WZG4 1122 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 TRAV20A0A0B4J274 112 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 SHOXO15266 292 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 RFPL3O75679 317 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 SLITRK5O94991 958 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 GLB1P16278 677 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 RAB6AP20340 208 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 CD247P20963 164 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 AUHQ13825 339 aaKnown RBP8.93□□□□□ -0.98
VMP1-215ENST00000592619 MAP7Q14244 749 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 RCC1LQ96I51 464 aaKnown RBP8.93□□□□□ -0.98
VMP1-215ENST00000592619 UBL7Q96S82 380 aaPredicted RBP8.93□□□□□ -0.98
VMP1-215ENST00000592619 MIPEPQ99797 713 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 DHRS4Q9BTZ2 278 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 ASPNQ9BXN1 380 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 MKRN2Q9H000 416 aaKnown RBP8.93□□□□□ -0.98
VMP1-215ENST00000592619 LRP2BPQ9P2M1 347 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 APEX2Q9UBZ4 518 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 DAGLAQ9Y4D2 1042 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 ZNF451Q9Y4E5 1061 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 CD2APQ9Y5K6 639 aa8.93□□□□□ -0.98
VMP1-215ENST00000592619 UNC13AQ9UPW8 1703 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 CNTNAP5Q8WYK1 1306 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 PPM1BO75688 479 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 ITGAVP06756 1048 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 NFICP08651 508 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 VIL1P09327 827 aaKnown RBP8.92□□□□□ -0.98
VMP1-215ENST00000592619 ANAPC15P60006 121 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 PPP2R2AP63151 447 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 FOXB2Q5VYV0 432 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 SEZ6L2Q6UXD5 910 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 SCUBE1Q8IWY4 988 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 LRRN4CLQ8ND94 238 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms