RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-226ENST00000591534 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 MYSM1Q5VVJ2 828 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 CCDC84Q86UT8 332 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-226ENST00000591534 ZNF384Q8TF68 577 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-226ENST00000591534 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
BRCA1-226ENST00000591534 MORF4L1Q9UBU8 362 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 FPGT-TNNI3KV9GXZ4 949 aa11.5□□□□□ -0.57
BRCA1-226ENST00000591534 MYH2Q9UKX2 1941 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 PNMA6EA0A0J9YXQ4 647 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 SURF6O75683 361 aaKnown RBP11.49□□□□□ -0.57
BRCA1-226ENST00000591534 GLRX3O76003 335 aaKnown RBP11.49□□□□□ -0.57
BRCA1-226ENST00000591534 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
BRCA1-226ENST00000591534 DNAJB2P25686 324 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 MTMR2Q13614 643 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 FTSJ3Q8IY81 847 aaKnown RBP11.49□□□□□ -0.57
BRCA1-226ENST00000591534 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 PAWRQ96IZ0 340 aaKnown RBP11.49□□□□□ -0.57
BRCA1-226ENST00000591534 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-226ENST00000591534 DOCK2Q92608 1830 aa11.49□□□□□ -0.57
BRCA1-226ENST00000591534 SLURP2P0DP57 97 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 HERVK_113P62684 666 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 CCNA1P78396 465 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 ATP8B2P98198 1209 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 USP17L2Q6R6M4 530 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
BRCA1-226ENST00000591534 MAPKAPK5Q8IW41 473 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 SSH3Q8TE77 659 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 ZMYND15Q9H091 742 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 GJD2Q9UKL4 321 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 FLT1P17948 1338 aa11.48□□□□□ -0.57
BRCA1-226ENST00000591534 ZSWIM8A7E2V4 1837 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 CYP2E1P05181 493 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-226ENST00000591534 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-226ENST00000591534 RGS2P41220 211 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 USP5P45974 858 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 USP14P54578 494 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 MAP3K12Q12852 859 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 DMRTA1Q5VZB9 504 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 ERC1Q8IUD2 1116 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 P2RX7Q99572 595 aaKnown RBP11.47□□□□□ -0.57
BRCA1-226ENST00000591534 FEZ1Q99689 392 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 PRO3102Q9H379 93 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 TMEM134Q9H6X4 195 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 PALD1Q9ULE6 856 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
BRCA1-226ENST00000591534 DOCK1Q14185 1865 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
BRCA1-226ENST00000591534 NEFLP07196 543 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 CD46P15529 392 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 CYP2B6P20813 491 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 CYP7A1P22680 504 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 BMP8BP34820 402 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 DBNDD2Q9BQY9 259 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 CABP5Q9NP86 173 aa11.46□□□□□ -0.57
BRCA1-226ENST00000591534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-226ENST00000591534 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 ARHGAP33O14559 1287 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 GDF11O95390 407 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 RLBP1P12271 317 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 ZAP70P43403 619 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 ERVK-9P63128 1117 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 ERVK-24P63145 666 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 RRP1BQ14684 758 aaKnown RBP11.45□□□□□ -0.58
BRCA1-226ENST00000591534 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 PLEKHH3Q7Z736 793 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 ITPRIPQ8IWB1 547 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 C7orf61Q8IZ16 206 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 SPIRE2Q8WWL2 714 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 EHD4Q9H223 541 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 STAP2Q9UGK3 403 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-226ENST00000591534 SAP30BPQ9UHR5 308 aaKnown RBP11.45□□□□□ -0.58
BRCA1-226ENST00000591534 SERPINB13Q9UIV8 391 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 NOP58Q9Y2X3 529 aaKnown RBP11.45□□□□□ -0.58
BRCA1-226ENST00000591534 RABGAP1Q9Y3P9 1069 aa11.45□□□□□ -0.58
BRCA1-226ENST00000591534 CEP290O15078 2479 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms