RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 RAD21O60216 631 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 RANBP6O60518 1105 aaKnown RBP13.68□□□□□ -0.22
VMP1-211ENST00000591315 SLC3A2P08195 630 aaKnown RBP13.68□□□□□ -0.22
VMP1-211ENST00000591315 FGRP09769 529 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 MFAP1P55081 439 aaKnown RBP13.68□□□□□ -0.22
VMP1-211ENST00000591315 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 PABPC4Q13310 644 aaKnown RBP eCLIP13.68□□□□□ -0.22
VMP1-211ENST00000591315 Q3C1V9 767 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
VMP1-211ENST00000591315 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 LRRC47Q8N1G4 583 aaKnown RBP13.68□□□□□ -0.22
VMP1-211ENST00000591315 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 TOMM22Q9NS69 142 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 RBPJLQ9UBG7 517 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 PNMA3Q9UL41 463 aa13.68□□□□□ -0.22
VMP1-211ENST00000591315 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 NEDD4P46934 1319 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
VMP1-211ENST00000591315 SGSM2O43147 1006 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 ORC4O43929 436 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 CNMDO75829 334 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 PAGR1Q9BTK6 254 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 TANGO6Q9C0B7 1094 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 NYAP2Q9P242 653 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 HPS5Q9UPZ3 1129 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
VMP1-211ENST00000591315 SPDYE16A6NNV3 312 aaPredicted RBP13.66□□□□□ -0.22
VMP1-211ENST00000591315 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
VMP1-211ENST00000591315 NDUFB10O96000 172 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 FBXO46Q6PJ61 603 aaPredicted RBP13.66□□□□□ -0.22
VMP1-211ENST00000591315 ZNF287Q9HBT7 754 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 BTBD7Q9P203 1132 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 GABRQQ9UN88 632 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 PTPN22Q9Y2R2 807 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 PLIN4Q96Q06 1357 aa13.66□□□□□ -0.22
VMP1-211ENST00000591315 RAD50Q92878 1312 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 PARP14Q460N5 1801 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 TSPY2A6NKD2 308 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 F5H6K3 240 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 ZNF213O14771 459 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 GCLCP48506 637 aaPredicted RBP13.65□□□□□ -0.22
VMP1-211ENST00000591315 KLRC3Q07444 240 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 KIF22Q14807 665 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 ESYT1Q9BSJ8 1104 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 PORCNQ9H237 461 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
VMP1-211ENST00000591315 B4E1Z4 1266 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 TTLL1O95922 423 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 PRKCZQ05513 592 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 MFSD6Q6ZSS7 791 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 RUFY2Q8WXA3 655 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 LPAR1Q92633 364 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 MKL1Q969V6 931 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 ATG4CQ96DT6 458 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 MTMR7Q9Y216 660 aa13.64□□□□□ -0.23
VMP1-211ENST00000591315 COL11A1P12107 1806 aaPredicted RBP13.63□□□□□ -0.23
VMP1-211ENST00000591315 WDR46O15213 610 aaKnown RBP13.63□□□□□ -0.23
VMP1-211ENST00000591315 FLOT1O75955 427 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 CYP21A2P08686 494 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 FCGRTP55899 365 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 ERVK-24P63145 666 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 COL9A3Q14050 684 aaPredicted RBP13.63□□□□□ -0.23
VMP1-211ENST00000591315 COG2Q14746 738 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 PKN2Q16513 984 aaKnown RBP13.63□□□□□ -0.23
VMP1-211ENST00000591315 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 RCSD1Q6JBY9 416 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 GPRC5AQ8NFJ5 357 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 LSG1Q9H089 658 aaKnown RBP13.63□□□□□ -0.23
VMP1-211ENST00000591315 GOPCQ9HD26 462 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 SRRDQ9UH36 339 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 MYPNQ86TC9 1320 aa13.63□□□□□ -0.23
VMP1-211ENST00000591315 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 TNPO2O14787 897 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms