RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 ATP2B2Q01814 1243 aa20.04■□□□□ 0.8
RPRD1A-209ENST00000590898 COL9A3Q14050 684 aaPredicted RBP20.04■□□□□ 0.8
RPRD1A-209ENST00000590898 CHST3Q7LGC8 479 aa20.04■□□□□ 0.8
RPRD1A-209ENST00000590898 PRRT2Q7Z6L0 340 aaPredicted RBP20.04■□□□□ 0.8
RPRD1A-209ENST00000590898 MANSC4A6NHS7 340 aaPredicted RBP20.03■□□□□ 0.8
RPRD1A-209ENST00000590898 USP17L2Q6R6M4 530 aa20.03■□□□□ 0.8
RPRD1A-209ENST00000590898 PAXIP1Q6ZW49 1069 aaPredicted RBP20.03■□□□□ 0.8
RPRD1A-209ENST00000590898 FASTKD5Q7L8L6 764 aaKnown RBP20.03■□□□□ 0.8
RPRD1A-209ENST00000590898 REM2Q8IYK8 340 aaPredicted RBP20.03■□□□□ 0.8
RPRD1A-209ENST00000590898 FEZ1Q99689 392 aa20.03■□□□□ 0.8
RPRD1A-209ENST00000590898 TMEM47Q9BQJ4 181 aa20.03■□□□□ 0.8
RPRD1A-209ENST00000590898 TESPA1A2RU30 521 aaPredicted RBP20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 CETPP11597 493 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 HTRA3P83110 453 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 MTMR2Q13614 643 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 WTAPQ15007 396 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 TMEM67Q5HYA8 995 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 IFIT1BQ5T764 474 aaKnown RBP20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 LPAR1Q92633 364 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 C12orf42Q96LP6 360 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 GOPCQ9HD26 462 aa20.02■□□□□ 0.8
RPRD1A-209ENST00000590898 PROCA1Q8NCQ7 364 aaPredicted RBP20.02■□□□□ 0.79
RPRD1A-209ENST00000590898 GMCL1P1Q8NEA9 526 aa20.02■□□□□ 0.79
RPRD1A-209ENST00000590898 AGXT2Q9BYV1 514 aa20.02■□□□□ 0.79
RPRD1A-209ENST00000590898 ALDH8A1Q9H2A2 487 aaPredicted RBP20.02■□□□□ 0.79
RPRD1A-209ENST00000590898 VCPKMTQ9H867 229 aa20.02■□□□□ 0.79
RPRD1A-209ENST00000590898 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 F5H6K3 240 aa20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 SH2B2O14492 632 aaPredicted RBP20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 MAP2K2P36507 400 aa20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 KLRC3Q07444 240 aa20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 SGMS1Q86VZ5 419 aa20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 LY9Q9HBG7 655 aa20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 EMILIN3Q9NT22 766 aa20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 TMOD4Q9NZQ9 345 aa20.01■□□□□ 0.79
RPRD1A-209ENST00000590898 HMGCS2P54868 508 aa20■□□□□ 0.79
RPRD1A-209ENST00000590898 KAT14Q9H8E8 782 aa20■□□□□ 0.79
RPRD1A-209ENST00000590898 CPA1P15085 419 aa20■□□□□ 0.79
RPRD1A-209ENST00000590898 VEGFBP49765 207 aa20■□□□□ 0.79
RPRD1A-209ENST00000590898 MKRN3Q13064 507 aaKnown RBP20■□□□□ 0.79
RPRD1A-209ENST00000590898 UPF3BQ9BZI7 483 aaKnown RBP20■□□□□ 0.79
RPRD1A-209ENST00000590898 CEP350Q5VT06 3117 aa19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 LOC285556D6RIA3 1793 aa19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 TM4SF4P48230 202 aa19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 SREBF2Q12772 1141 aa19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 MOGSQ13724 837 aa19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 LRRC47Q8N1G4 583 aaKnown RBP19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 PNMA1Q8ND90 353 aa19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 PCNTO95613 3336 aa19.99■□□□□ 0.79
RPRD1A-209ENST00000590898 CCL15-CCL14A0A0B4J2E2 113 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 FGD1P98174 961 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 KIF23Q02241 960 aaPredicted RBP19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 CCL15Q16663 113 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 Q6ZUG5 572 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 LRRC2Q9BYS8 371 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 PDRG1Q9NUG6 133 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 RABEP1Q15276 862 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 BRI3BPQ8WY22 251 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 GMCL1Q96IK5 515 aa19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 ZCCHC17Q9NP64 241 aaKnown RBP19.98■□□□□ 0.79
RPRD1A-209ENST00000590898 WDR46O15213 610 aaKnown RBP19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 NDUFB10O96000 172 aa19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 HOXA7P31268 230 aaPredicted RBP19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 NEK4P51957 841 aa19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 GRM1Q13255 1194 aa19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 ZYXQ15942 572 aaKnown RBP19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 SLFN13Q68D06 897 aa19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 GPHNQ9NQX3 736 aaPredicted RBP19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 SLC45A1Q9Y2W3 748 aa19.97■□□□□ 0.79
RPRD1A-209ENST00000590898 CCDC69A6NI79 296 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 SNHG28P0DPA3 235 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 EVCP57679 992 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 GADL1Q6ZQY3 521 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 CATIPQ7Z7H3 387 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 ANKRD23Q86SG2 305 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 DCAF4Q8WV16 495 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 MAP3K14Q99558 947 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 SENP2Q9HC62 589 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 AGTPBP1Q9UPW5 1226 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 AOC2O75106 756 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 VCAM1P19320 739 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 TROAPQ12815 778 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 PABPC4Q13310 644 aaKnown RBP eCLIP19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 ANKRD1Q15327 319 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 KIAA1755Q5JYT7 1200 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 OTUD7BQ6GQQ9 843 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 GPAT2Q6NUI2 795 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 NFXL1Q6ZNB6 911 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 DNAJC5GQ8N7S2 189 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 ZIC5Q96T25 663 aa19.96■□□□□ 0.79
RPRD1A-209ENST00000590898 RCAN1P53805 252 aa19.95■□□□□ 0.78
RPRD1A-209ENST00000590898 PTPN18Q99952 460 aa19.95■□□□□ 0.78
RPRD1A-209ENST00000590898 SLC12A7Q9Y666 1083 aa19.95■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L15C9J2P7 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L13C9JLJ4 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L11C9JVI0 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L18D6R9N7 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L22D6RA61 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L17D6RBQ6 530 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms