RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 GOLGA6L3A6NEY3 463 aa12.85□□□□□ -0.35
SEH1L-208ENST00000590843 PRPF6O94906 941 aaKnown RBP12.85□□□□□ -0.35
SEH1L-208ENST00000590843 SUPT20HL2P0C7V6 817 aa12.85□□□□□ -0.35
SEH1L-208ENST00000590843 PDE1AP54750 535 aa12.85□□□□□ -0.35
SEH1L-208ENST00000590843 SEPT14Q6ZU15 432 aa12.85□□□□□ -0.35
SEH1L-208ENST00000590843 PCSK9Q8NBP7 692 aaKnown RBP12.85□□□□□ -0.35
SEH1L-208ENST00000590843 PSTPIP2Q9H939 334 aa12.85□□□□□ -0.35
SEH1L-208ENST00000590843 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
SEH1L-208ENST00000590843 ATP5JP18859 108 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
SEH1L-208ENST00000590843 MSCO60682 206 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 GDF11O95390 407 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 HDLBPQ00341 1268 aaKnown RBP12.84□□□□□ -0.35
SEH1L-208ENST00000590843 NEDD9Q14511 834 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 AKNAD1Q5T1N1 836 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 COPRSQ9NQ92 184 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 DNM3Q9UQ16 869 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 TOMM70O94826 608 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 HOXC6P09630 235 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 SDSP20132 328 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 SYDE2Q5VT97 1194 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
SEH1L-208ENST00000590843 SLC7A3Q8WY07 619 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 POLR3EQ9NVU0 708 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 TBC1D16Q8TBP0 767 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 DCAF4Q8WV16 495 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 LPAR1Q92633 364 aa12.84□□□□□ -0.35
SEH1L-208ENST00000590843 PDE6AP16499 860 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 POLGP54098 1239 aaPredicted RBP12.83□□□□□ -0.36
SEH1L-208ENST00000590843 TTC22Q5TAA0 569 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 ACAD9Q9H845 621 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 PSMD14O00487 310 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 CTAGE5O15320 804 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 IGBP1P78318 339 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 BFSP2Q13515 415 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 CEP85Q6P2H3 762 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 DDX39AO00148 427 aaKnown RBP12.83□□□□□ -0.36
SEH1L-208ENST00000590843 PRMT2P55345 433 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 SPA17Q15506 151 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 SEPT7Q16181 437 aaKnown RBP12.83□□□□□ -0.36
SEH1L-208ENST00000590843 LETM2Q2VYF4 491 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
SEH1L-208ENST00000590843 NFKBIAP25963 317 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 ASIC1P78348 528 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
SEH1L-208ENST00000590843 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
SEH1L-208ENST00000590843 PTPREP23469 700 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 FSTL1Q12841 308 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 NBPF10Q6P3W6 841 aaKnown RBP12.82□□□□□ -0.36
SEH1L-208ENST00000590843 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
SEH1L-208ENST00000590843 PRDM1O75626 825 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 GAS8O95995 478 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 KRT10P13645 584 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 NCAPH2Q6IBW4 605 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 ZNF280CQ8ND82 737 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 NT5C3AQ9H0P0 336 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
SEH1L-208ENST00000590843 CYP2E1P05181 493 aaPredicted RBP12.82□□□□□ -0.36
SEH1L-208ENST00000590843 DGKZQ13574 1117 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 RGMBQ6NW40 437 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 RNF207Q6ZRF8 634 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 G2E3Q7L622 706 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 FAM184BQ9ULE4 1060 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 KDM3AQ9Y4C1 1321 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 GYS1P13807 737 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 HDAC1Q13547 482 aaPredicted RBP12.82□□□□□ -0.36
SEH1L-208ENST00000590843 DPH6Q7L8W6 267 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 PLA2G4DQ86XP0 818 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 SOCS4Q8WXH5 440 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 SERPINA10Q9UK55 444 aa12.82□□□□□ -0.36
SEH1L-208ENST00000590843 PREX1Q8TCU6 1659 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 TNNC2P02585 160 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 TRIM28Q13263 835 aaKnown RBP12.81□□□□□ -0.36
SEH1L-208ENST00000590843 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
SEH1L-208ENST00000590843 WDR11Q9BZH6 1224 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 PIK3C2BO00750 1634 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 DDAH1O94760 285 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 STAG3L1P0CL83 205 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 NEFHP12036 1026 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 STAT3P40763 770 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 SV2BQ7L1I2 683 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 TCP11Q8WWU5 503 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 DPF2Q92785 391 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 MIS12Q9H081 205 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 ACBD3Q9H3P7 528 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 COG2Q14746 738 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 ARMCX5Q6P1M9 558 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 LRRC47Q8N1G4 583 aaKnown RBP12.81□□□□□ -0.36
SEH1L-208ENST00000590843 PSMA7O14818 248 aa12.81□□□□□ -0.36
SEH1L-208ENST00000590843 CYP2B6P20813 491 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1090.7 ms