RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 PCNTO95613 3336 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 ZKSCAN1P17029 563 aaPredicted RBP19.82■□□□□ 0.76
LSM14A-208ENST00000590416 VCAM1P19320 739 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 MCCP23508 829 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 NT5C2P49902 561 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 CRHR2Q13324 411 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 SMCR8Q8TEV9 937 aaPredicted RBP19.82■□□□□ 0.76
LSM14A-208ENST00000590416 C12orf42Q96LP6 360 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 UBAC1Q9BSL1 405 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 IL17RBQ9NRM6 502 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 MTMR7Q9Y216 660 aa19.82■□□□□ 0.76
LSM14A-208ENST00000590416 EIF5BO60841 1220 aaKnown RBP19.81■□□□□ 0.76
LSM14A-208ENST00000590416 CYP2C8P10632 490 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
LSM14A-208ENST00000590416 CCDC178Q5BJE1 867 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 SAMD1Q6SPF0 538 aaPredicted RBP19.81■□□□□ 0.76
LSM14A-208ENST00000590416 STOX1Q6ZVD7 989 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 NKX2-3Q8TAU0 364 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 TANGO6Q9C0B7 1094 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 RPAP3Q9H6T3 665 aaPredicted RBP19.81■□□□□ 0.76
LSM14A-208ENST00000590416 TCP11L1Q9NUJ3 509 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 ZSWIM5Q9P217 1185 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 SLC45A1Q9Y2W3 748 aa19.81■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L15C9J2P7 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L13C9JLJ4 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L11C9JVI0 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L18D6R9N7 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L22D6RA61 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L17D6RBQ6 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L19D6RCP7 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L20D6RJB6 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 USP17L24Q0WX57 530 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 LPAR1Q92633 364 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 CHMP4CQ96CF2 233 aa19.8■□□□□ 0.76
LSM14A-208ENST00000590416 ERICH2A1L162 156 aa19.79■□□□□ 0.76
LSM14A-208ENST00000590416 WDR46O15213 610 aaKnown RBP19.79■□□□□ 0.76
LSM14A-208ENST00000590416 HSPA8P11142 646 aaKnown RBP19.79■□□□□ 0.76
LSM14A-208ENST00000590416 KIAA1755Q5JYT7 1200 aa19.79■□□□□ 0.76
LSM14A-208ENST00000590416 CYB5R4Q7L1T6 521 aa19.79■□□□□ 0.76
LSM14A-208ENST00000590416 ZSCAN10Q96SZ4 725 aaPredicted RBP19.79■□□□□ 0.76
LSM14A-208ENST00000590416 ASCC2Q9H1I8 757 aaPredicted RBP19.79■□□□□ 0.76
LSM14A-208ENST00000590416 R3HDMLQ9H3Y0 253 aa19.79■□□□□ 0.76
LSM14A-208ENST00000590416 TNKSO95271 1327 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 F5H6K3 240 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 TOP1P11387 765 aaKnown RBP19.78■□□□□ 0.76
LSM14A-208ENST00000590416 HOXA7P31268 230 aaPredicted RBP19.78■□□□□ 0.76
LSM14A-208ENST00000590416 LBX1P52954 281 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 KLRC3Q07444 240 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 SART3Q15020 963 aaKnown RBP19.78■□□□□ 0.76
LSM14A-208ENST00000590416 SLFN13Q68D06 897 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 CHST3Q7LGC8 479 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 MKL1Q969V6 931 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 CPA4Q9UI42 421 aa19.78■□□□□ 0.76
LSM14A-208ENST00000590416 IFIT3O14879 490 aaKnown RBP19.77■□□□□ 0.76
LSM14A-208ENST00000590416 TLR2O60603 784 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 NDUFB10O96000 172 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 HSPA4P34932 840 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 KRT32Q14532 448 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 FAM83BQ5T0W9 1011 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 CATSPERGQ6ZRH7 1159 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 GMCL1P1Q8NEA9 526 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 TTC14Q96N46 770 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 NUP88Q99567 741 aaPredicted RBP19.77■□□□□ 0.76
LSM14A-208ENST00000590416 TMEM47Q9BQJ4 181 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 CFHR5Q9BXR6 569 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 USP26Q9BXU7 913 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 KAT14Q9H8E8 782 aa19.77■□□□□ 0.76
LSM14A-208ENST00000590416 CASP8AP2Q9UKL3 1982 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 GPR25O00155 361 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 EPB41L2O43491 1005 aaKnown RBP19.76■□□□□ 0.75
LSM14A-208ENST00000590416 FLOT1O75955 427 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 CCDC96Q2M329 555 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 IFIT1BQ5T764 474 aaKnown RBP19.76■□□□□ 0.75
LSM14A-208ENST00000590416 DGKHQ86XP1 1220 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 MB21D2Q8IYB1 491 aaPredicted RBP19.76■□□□□ 0.75
LSM14A-208ENST00000590416 RASEFQ8IZ41 740 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 NEK1Q96PY6 1258 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 SYNPO2Q9UMS6 1093 aa19.76■□□□□ 0.75
LSM14A-208ENST00000590416 PRC1O43663 620 aa19.75■□□□□ 0.75
LSM14A-208ENST00000590416 ECM2O94769 699 aaPredicted RBP19.75■□□□□ 0.75
LSM14A-208ENST00000590416 MCM5P33992 734 aa19.75■□□□□ 0.75
LSM14A-208ENST00000590416 SLC1A4P43007 532 aa19.75■□□□□ 0.75
LSM14A-208ENST00000590416 HERVK_113P62684 666 aa19.75■□□□□ 0.75
LSM14A-208ENST00000590416 IKQ13123 557 aaPredicted RBP19.75■□□□□ 0.75
LSM14A-208ENST00000590416 C8orf34Q49A92 452 aa19.75■□□□□ 0.75
LSM14A-208ENST00000590416 ENAHQ8N8S7 591 aaPredicted RBP19.75■□□□□ 0.75
LSM14A-208ENST00000590416 P2RX7Q99572 595 aaKnown RBP19.75■□□□□ 0.75
LSM14A-208ENST00000590416 FKTNO75072 461 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 BMP3P12645 472 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 WTAPQ15007 396 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 ADCK5Q3MIX3 580 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 TMEM67Q5HYA8 995 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 RCSD1Q6JBY9 416 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 ANKRD13CQ8N6S4 541 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 JAKMIP1Q96N16 626 aaKnown RBP19.74■□□□□ 0.75
LSM14A-208ENST00000590416 PAGR1Q9BTK6 254 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 SNX14Q9Y5W7 946 aa19.74■□□□□ 0.75
LSM14A-208ENST00000590416 GCLCP48506 637 aaPredicted RBP19.73■□□□□ 0.75
LSM14A-208ENST00000590416 NOVP48745 357 aa19.73■□□□□ 0.75
LSM14A-208ENST00000590416 ANTXR2P58335 489 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms