RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-208	ENST00000590301	HABP4	Q5JVS0	413 aa	Known RBP	9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	MORN1	Q5T089	497 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	C16orf86	Q6ZW13	317 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	GPR142	Q7Z601	462 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	PIP4P2	Q8N4L2	257 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	APPBP2	Q92624	585 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	DPF3	Q92784	378 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	KANSL2	Q9H9L4	492 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	ZNF287	Q9HBT7	754 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	PCDH10	Q9P2E7	1040 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	TMX2	Q9Y320	296 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301	CENPF	P49454	3210 aa		9.12	□□□□□ -0.95
NPC1-208	ENST00000590301		A0A1W2PRG0	241 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	SPDYE16	A6NNV3	312 aa	Predicted RBP	9.11	□□□□□ -0.95
NPC1-208	ENST00000590301		H0YGN5	161 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	RNF113A	O15541	343 aa	Known RBP	9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	STRN	O43815	780 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	CNMD	O75829	334 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	HOXC6	P09630	235 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	CDK8	P49336	464 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	RRP1	P56182	461 aa	Known RBP	9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	MAP2K5	Q13163	448 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301		Q3C1V9	767 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	NECAB2	Q7Z6G3	386 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	SLC44A5	Q8NCS7	719 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	SHCBP1	Q8NEM2	672 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	TRIB2	Q92519	343 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	STRBP	Q96SI9	672 aa	Known RBP	9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	TANGO6	Q9C0B7	1094 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	PUS7L	Q9H0K6	701 aa	Known RBP	9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	PORCN	Q9H237	461 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	IVNS1ABP	Q9Y6Y0	642 aa		9.11	□□□□□ -0.95
NPC1-208	ENST00000590301	WDR46	O15213	610 aa	Known RBP	9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	PRKAR2A	P13861	404 aa	Known RBP	9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	AKR1B1	P15121	316 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	CYP2B6	P20813	491 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	PTPRE	P23469	700 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	GRB14	Q14449	540 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	MFSD14C	Q5VZR4	134 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	CTR9	Q6PD62	1173 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	POTEE	Q6S8J3	1075 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	TICAM2	Q86XR7	235 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	ABRA	Q8N0Z2	381 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	DYNLL2	Q96FJ2	89 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	NACAP1	Q9BZK3	213 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	NBPF3	Q9H094	633 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	MROH8	Q9H579	483 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	VCPKMT	Q9H867	229 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	GOPC	Q9HD26	462 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	SLC5A4	Q9NY91	659 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	BTBD7	Q9P203	1132 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	OGDHL	Q9ULD0	1010 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	SYNPO2	Q9UMS6	1093 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	KIAA0100	Q14667	2235 aa	Known RBP	9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	ROBO3	Q96MS0	1386 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	SIPA1L1	O43166	1804 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	PHIP	Q8WWQ0	1821 aa		9.1	□□□□□ -0.95
NPC1-208	ENST00000590301	AK9	Q5TCS8	1911 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	GSG1L2	A8MUP6	293 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	EVI5	O60447	810 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	MSC	O60682	206 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	COPB2	P35606	906 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	EVX2	Q03828	476 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	CACNB2	Q08289	660 aa	Predicted RBP	9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	SLFNL1	Q499Z3	407 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	WDR78	Q5VTH9	848 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	SIAH1	Q8IUQ4	282 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	HS6ST3	Q8IZP7	471 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	OSBP2	Q969R2	916 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	SPATC1L	Q9H0A9	340 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	MKNK2	Q9HBH9	465 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	PCDHB15	Q9Y5E8	787 aa		9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	MKI67	P46013	3256 aa	Known RBP	9.09	□□□□□ -0.95
NPC1-208	ENST00000590301	DDX60L	Q5H9U9	1706 aa	Known RBP	9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	BRCA2	P51587	3418 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	ZSWIM8	A7E2V4	1837 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	CYP2D7	A0A087X1C5	515 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301		A0A1W2PPC1	479 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	GPAA1	O43292	621 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	PEX10	O60683	326 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	FLOT1	O75955	427 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	SLC25A27	O95847	323 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	EEF2	P13639	858 aa	Known RBP	9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	MX1	P20591	662 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	TDO2	P48775	406 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	ATP2B2	Q01814	1243 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	TRIM32	Q13049	653 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	HDAC1	Q13547	482 aa	Predicted RBP	9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	PPP4R3B	Q5MIZ7	849 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	OLFML2B	Q68BL8	750 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	SPDYE1	Q8NFV5	336 aa	Predicted RBP	9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	PI4K2B	Q8TCG2	481 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	PAWR	Q96IZ0	340 aa	Known RBP	9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	MOV10L1	Q9BXT6	1211 aa	Known RBP	9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	NYAP2	Q9P242	653 aa		9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	COLQ	Q9Y215	455 aa	Predicted RBP	9.08	□□□□□ -0.96
NPC1-208	ENST00000590301	PATL2	C9JE40	543 aa	Known RBP	9.07	□□□□□ -0.96
NPC1-208	ENST00000590301	CHGB	P05060	677 aa		9.07	□□□□□ -0.96
NPC1-208	ENST00000590301	APP	P05067	770 aa		9.07	□□□□□ -0.96
NPC1-208	ENST00000590301	SLC3A2	P08195	630 aa	Known RBP	9.07	□□□□□ -0.96

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