RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 MAPK8IP1Q9UQF2 711 aa17.78■□□□□ 0.44
MBD1-222ENST00000590208 MST1RQ04912 1400 aa17.77■□□□□ 0.44
MBD1-222ENST00000590208 WNT7AO00755 349 aa17.77■□□□□ 0.44
MBD1-222ENST00000590208 SHOX2O60902 331 aaPredicted RBP17.77■□□□□ 0.44
MBD1-222ENST00000590208 MRPS25P82663 173 aaKnown RBP17.77■□□□□ 0.44
MBD1-222ENST00000590208 EARS2Q5JPH6 523 aaKnown RBP17.77■□□□□ 0.44
MBD1-222ENST00000590208 SPEF2Q9C093 1822 aa17.77■□□□□ 0.44
MBD1-222ENST00000590208 COPB1P53618 953 aaKnown RBP17.77■□□□□ 0.43
MBD1-222ENST00000590208 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.43
MBD1-222ENST00000590208 BCAS4Q8TDM0 211 aa17.77■□□□□ 0.43
MBD1-222ENST00000590208 STK36Q9NRP7 1315 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 PSMD14O00487 310 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 EBAG9O00559 213 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 CCDC122Q5T0U0 273 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 SH3RF1Q7Z6J0 888 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 SAMM50Q9Y512 469 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 HERVK_113P62684 666 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 RRAGBQ5VZM2 374 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 KCNV1Q6PIU1 500 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 PIH1D3Q9NQM4 214 aaKnown RBP17.76■□□□□ 0.43
MBD1-222ENST00000590208 GNL3LQ9NVN8 582 aaKnown RBP17.76■□□□□ 0.43
MBD1-222ENST00000590208 ZNF532Q9HCE3 1301 aa17.76■□□□□ 0.43
MBD1-222ENST00000590208 TTC26A0AVF1 554 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 HNRNPH1P31943 449 aaKnown RBP17.75■□□□□ 0.43
MBD1-222ENST00000590208 CCNI2Q6ZMN8 369 aaPredicted RBP17.75■□□□□ 0.43
MBD1-222ENST00000590208 TRIM22Q8IYM9 498 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 hCG_1642624A0A1W2PR95 340 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 GOLGA6BA6NDN3 693 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 SEMA3EO15041 775 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 UBXN1Q04323 297 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 C2orf54Q08AI8 447 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 WASF1Q92558 559 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 JAKMIP2Q96AA8 810 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 RRP36Q96EU6 259 aaKnown RBP17.75■□□□□ 0.43
MBD1-222ENST00000590208 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.75■□□□□ 0.436e-7■■■■□ 23.3
MBD1-222ENST00000590208 VPS54Q9P1Q0 977 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 LIMA1Q9UHB6 759 aaKnown RBP17.75■□□□□ 0.43
MBD1-222ENST00000590208 TMEM94Q12767 1356 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 MNAT1P51948 309 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 EZH2Q15910 746 aaKnown RBP17.75■□□□□ 0.43
MBD1-222ENST00000590208 RTN1Q16799 776 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 CAGE1Q8TC20 777 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 NUP133Q8WUM0 1156 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 GSDMAQ96QA5 445 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 DUSP10Q9Y6W6 482 aa17.75■□□□□ 0.43
MBD1-222ENST00000590208 MYO5AQ9Y4I1 1855 aaKnown RBP17.74■□□□□ 0.43
MBD1-222ENST00000590208 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 LRRC10BA6NIK2 292 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 LIFRP42702 1097 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 CAPS2Q9BXY5 557 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 AATFQ9NY61 560 aaKnown RBP eCLIP17.74■□□□□ 0.43
MBD1-222ENST00000590208 RCCD1A6NED2 376 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 KCNJ18B7U540 433 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 PES1O00541 588 aaKnown RBP17.74■□□□□ 0.43
MBD1-222ENST00000590208 CYP27B1O15528 508 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 KCNJ12Q14500 433 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 TCP11X2Q5H9J9 407 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 SWT1Q5T5J6 900 aaKnown RBP17.74■□□□□ 0.43
MBD1-222ENST00000590208 IFNL2Q8IZJ0 200 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 HDAC7Q8WUI4 952 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 LACRTQ9GZZ8 138 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 HAUS4Q9H6D7 363 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 POLD4Q9HCU8 107 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
MBD1-222ENST00000590208 GRIN2DO15399 1336 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 WDR17Q8IZU2 1322 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 MCM3P25205 808 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 GNGT1P63211 74 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 TTF1Q15361 905 aaPredicted RBP17.73■□□□□ 0.43
MBD1-222ENST00000590208 PAPD7Q5XG87 772 aaKnown RBP17.73■□□□□ 0.43
MBD1-222ENST00000590208 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
MBD1-222ENST00000590208 SLIT3O75094 1523 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 TRIM75PA6NK02 468 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 TATP17735 454 aaPredicted RBP17.73■□□□□ 0.43
MBD1-222ENST00000590208 CT47A1Q5JQC4 288 aaPredicted RBP17.73■□□□□ 0.43
MBD1-222ENST00000590208 FKBP15Q5T1M5 1219 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 SND1Q7KZF4 910 aaKnown RBP eCLIP17.73■□□□□ 0.43
MBD1-222ENST00000590208 EPB41L4AQ9HCS5 686 aaPredicted RBP17.73■□□□□ 0.43
MBD1-222ENST00000590208 XDHP47989 1333 aa17.73■□□□□ 0.43
MBD1-222ENST00000590208 TARSL2A2RTX5 802 aaKnown RBP17.72■□□□□ 0.43
MBD1-222ENST00000590208 PPARAQ07869 468 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 WDR59Q6PJI9 974 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 AIDAQ96BJ3 306 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 CEP89Q96ST8 783 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 CABP4P57796 275 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 PPFIA1Q13136 1202 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 ZNF174Q15697 407 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 FAM107BQ9H098 131 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 SCN11AQ9UI33 1791 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
MBD1-222ENST00000590208 PRDM1O75626 825 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 DEXIO95424 95 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 OR8K1Q8NGG5 319 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 NELFBQ8WX92 580 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 FAM89AQ96GI7 184 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
MBD1-222ENST00000590208 TBC1D2BQ9UPU7 963 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 TRIM49BA6NDI0 452 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms