RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SGMS1Q86VZ5 419 aa17.79■□□□□ 0.44
ATG4D-211ENST00000589753 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
ATG4D-211ENST00000589753 KIAA1683Q9H0B3 1180 aa17.79■□□□□ 0.44
ATG4D-211ENST00000589753 GJA5P36382 358 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 USP14P54578 494 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 BACE1P56817 501 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 APOBRQ0VD83 1088 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 MTMR2Q13614 643 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 ZYXQ15942 572 aaKnown RBP17.78■□□□□ 0.44
ATG4D-211ENST00000589753 RASAL3Q86YV0 1011 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 GOPCQ9HD26 462 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 KCNH4Q9UQ05 1017 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 SLC12A7Q9Y666 1083 aa17.78■□□□□ 0.44
ATG4D-211ENST00000589753 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 C19orf81C9J6K1 198 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 CXCL11O14625 94 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 RAD21O60216 631 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 ZBTB48P10074 688 aaPredicted RBP17.77■□□□□ 0.44
ATG4D-211ENST00000589753 SPRYD7Q5W111 196 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 SYNE3Q6ZMZ3 975 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 CATIPQ7Z7H3 387 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 ZNF654Q8IZM8 581 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 GMCL1P1Q8NEA9 526 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 CCDC102AQ96A19 550 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 VCPKMTQ9H867 229 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.44
ATG4D-211ENST00000589753 F5H6K3 240 aa17.76■□□□□ 0.43
ATG4D-211ENST00000589753 SLC10A3P09131 477 aa17.76■□□□□ 0.43
ATG4D-211ENST00000589753 KLRC3Q07444 240 aa17.76■□□□□ 0.43
ATG4D-211ENST00000589753 MKRN3Q13064 507 aaKnown RBP17.76■□□□□ 0.43
ATG4D-211ENST00000589753 SH3D19Q5HYK7 790 aa17.76■□□□□ 0.43
ATG4D-211ENST00000589753 APOA5Q6Q788 366 aa17.76■□□□□ 0.43
ATG4D-211ENST00000589753 USP17L2Q6R6M4 530 aa17.76■□□□□ 0.43
ATG4D-211ENST00000589753 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
ATG4D-211ENST00000589753 LARP6Q9BRS8 491 aaKnown RBP17.76■□□□□ 0.43
ATG4D-211ENST00000589753 NAP1L2Q9ULW6 460 aaPredicted RBP17.76■□□□□ 0.43
ATG4D-211ENST00000589753 MTMR7Q9Y216 660 aa17.76■□□□□ 0.43
ATG4D-211ENST00000589753 A0A0G2JLL6 359 aaPredicted RBP17.75■□□□□ 0.43
ATG4D-211ENST00000589753 RASSF10A6NK89 507 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 DDAH1O94760 285 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 NDUFB10O96000 172 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 HMGCS2P54868 508 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 EVCP57679 992 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 DEFB115Q30KQ5 88 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 SLFN13Q68D06 897 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 PAXIP1Q6ZW49 1069 aaPredicted RBP17.75■□□□□ 0.43
ATG4D-211ENST00000589753 PRRT2Q7Z6L0 340 aaPredicted RBP17.75■□□□□ 0.43
ATG4D-211ENST00000589753 NUP133Q8WUM0 1156 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 LPAR1Q92633 364 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 EMILIN3Q9NT22 766 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 TMOD4Q9NZQ9 345 aa17.75■□□□□ 0.43
ATG4D-211ENST00000589753 ZBTB43O43298 467 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 CALM1P0DP23 149 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 CALM2P0DP24 149 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 CALM3P0DP25 149 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 GTF2A2P52657 109 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 C1QTNF8P60827 252 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 TROAPQ12815 778 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 DGKZQ13574 1117 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 KIAA1755Q5JYT7 1200 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 SPICE1Q8N0Z3 855 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 DCAF4Q8WV16 495 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 C12orf42Q96LP6 360 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 TPCN1Q9ULQ1 816 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
ATG4D-211ENST00000589753 GOLGA8BA8MQT2 603 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 FAM155AB1AL88 458 aaPredicted RBP17.73■□□□□ 0.43
ATG4D-211ENST00000589753 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
ATG4D-211ENST00000589753 SNHG28P0DPA3 235 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 PDHBP11177 359 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 MCM2P49736 904 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 RCAN1P53805 252 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 CYP4F22Q6NT55 531 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 RAB11FIP4Q86YS3 637 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 PROCA1Q8NCQ7 364 aaPredicted RBP17.73■□□□□ 0.43
ATG4D-211ENST00000589753 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 ZNF274Q96GC6 653 aaPredicted RBP17.73■□□□□ 0.43
ATG4D-211ENST00000589753 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
ATG4D-211ENST00000589753 PTPRFP10586 1907 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 WDR46O15213 610 aaKnown RBP17.72■□□□□ 0.43
ATG4D-211ENST00000589753 PARP1P09874 1014 aaKnown RBP17.72■□□□□ 0.43
ATG4D-211ENST00000589753 CETPP11597 493 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 VCAM1P19320 739 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 RXRAP19793 462 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 PDIA3P30101 505 aaKnown RBP17.72■□□□□ 0.43
ATG4D-211ENST00000589753 SLC1A4P43007 532 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 GRM1Q13255 1194 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 GRM4Q14833 912 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 CCDC96Q2M329 555 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 GADL1Q6ZQY3 521 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
ATG4D-211ENST00000589753 RASGRP2Q7LDG7 609 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 CTCFLQ8NI51 663 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-211ENST00000589753 MS4A4AQ96JQ5 239 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 MAP3K14Q99558 947 aa17.72■□□□□ 0.43
ATG4D-211ENST00000589753 LOC285556D6RIA3 1793 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms