RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZSCAN10Q96SZ4 725 aaPredicted RBP22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 UBAC1Q9BSL1 405 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 GPAT2Q6NUI2 795 aa22.33■■□□□ 1.17
CLPTM1-209ENST00000588855 ENAHQ8N8S7 591 aaPredicted RBP22.33■■□□□ 1.17
CLPTM1-209ENST00000588855 C12orf42Q96LP6 360 aa22.33■■□□□ 1.17
CLPTM1-209ENST00000588855 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.17
CLPTM1-209ENST00000588855 VCPKMTQ9H867 229 aa22.33■■□□□ 1.17
CLPTM1-209ENST00000588855 AGTPBP1Q9UPW5 1226 aa22.32■■□□□ 1.16
CLPTM1-209ENST00000588855 PRC1O43663 620 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 RAD21O60216 631 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 VCAM1P19320 739 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 MCM5P33992 734 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 CCDC178Q5BJE1 867 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 ANKRD23Q86SG2 305 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 SPICE1Q8N0Z3 855 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 JMYQ8N9B5 988 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 TMEM47Q9BQJ4 181 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 GOPCQ9HD26 462 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 TOP1P11387 765 aaKnown RBP22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 CPA1P15085 419 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 SEC23AQ15436 765 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 DGKHQ86XP1 1220 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 TTC14Q96N46 770 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 SYNPO2Q9UMS6 1093 aa22.31■■□□□ 1.16
CLPTM1-209ENST00000588855 PARP14Q460N5 1801 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 F5H6K3 240 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 PDHXO00330 501 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 IFIT3O14879 490 aaKnown RBP22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 NDUFB10O96000 172 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 MAP2K1Q02750 393 aaPredicted RBP22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 KLRC3Q07444 240 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 RASGRP2Q7LDG7 609 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 GMCL1P1Q8NEA9 526 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 LPAR1Q92633 364 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 TCEANC2Q96MN5 208 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 LRRC2Q9BYS8 371 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 BACH2Q9BYV9 841 aa22.3■■□□□ 1.16
CLPTM1-209ENST00000588855 SART3Q15020 963 aaKnown RBP22.29■■□□□ 1.16
CLPTM1-209ENST00000588855 OTUD7BQ6GQQ9 843 aa22.29■■□□□ 1.16
CLPTM1-209ENST00000588855 ANKS1AQ92625 1134 aa22.29■■□□□ 1.16
CLPTM1-209ENST00000588855 SENP2Q9HC62 589 aa22.29■■□□□ 1.16
CLPTM1-209ENST00000588855 GPHNQ9NQX3 736 aaPredicted RBP22.29■■□□□ 1.16
CLPTM1-209ENST00000588855 ERICH2A1L162 156 aa22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 CASTP20810 708 aaKnown RBP22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 TMEM67Q5HYA8 995 aa22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 IFIT1BQ5T764 474 aaKnown RBP22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 DHX32Q7L7V1 743 aaKnown RBP22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 IGDCC4Q8TDY8 1250 aa22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 CHMP4CQ96CF2 233 aa22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 NUP88Q99567 741 aaPredicted RBP22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 RPAP3Q9H6T3 665 aaPredicted RBP22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 RNF186Q9NXI6 227 aa22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 MTMR7Q9Y216 660 aa22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 RLFQ13129 1914 aa22.28■■□□□ 1.16
CLPTM1-209ENST00000588855 WDR46O15213 610 aaKnown RBP22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 HMGB1P09429 215 aaKnown RBP22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 ANAPC15P60006 121 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 EXOSC10Q01780 885 aaKnown RBP22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 WTAPQ15007 396 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 SLFN13Q68D06 897 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 BLOC1S2Q6QNY1 142 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 TMEM87BQ96K49 555 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 KAT14Q9H8E8 782 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 WBP1LQ9NX94 342 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 SLC45A1Q9Y2W3 748 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 WDR19Q8NEZ3 1342 aa22.27■■□□□ 1.16
CLPTM1-209ENST00000588855 SH2B2O14492 632 aaPredicted RBP22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 ALDH1A1P00352 501 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 PSMA5P28066 241 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 TAF1CQ15572 869 aaPredicted RBP22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 FAM83BQ5T0W9 1011 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 PNMA1Q8ND90 353 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 MTA3Q9BTC8 594 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 LY9Q9HBG7 655 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 TRPA1O75762 1119 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 CYP2C8P10632 490 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 RPS6KB1P23443 525 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 HOXA7P31268 230 aaPredicted RBP22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 PABPC4Q13310 644 aaKnown RBP eCLIP22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 C22orf23Q9BZE7 217 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 TANGO6Q9C0B7 1094 aa22.26■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L15C9J2P7 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L13C9JLJ4 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L11C9JVI0 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L18D6R9N7 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L22D6RA61 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L17D6RBQ6 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L19D6RCP7 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L20D6RJB6 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 USP17L24Q0WX57 530 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 CATSPERGQ6ZRH7 1159 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 IL17RAQ96F46 866 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 GMCL1Q96IK5 515 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 UPF3BQ9BZI7 483 aaKnown RBP22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 TM6SF1Q9BZW5 370 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 ASCC2Q9H1I8 757 aaPredicted RBP22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 ZSWIM6Q9HCJ5 1215 aa22.25■■□□□ 1.15
CLPTM1-209ENST00000588855 PNMA3Q9UL41 463 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms