RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 F5H6K3 240 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 IFIT3O14879 490 aaKnown RBP10.65□□□□□ -0.7
CIRBP-218ENST00000588344 WDR46O15213 610 aaKnown RBP10.65□□□□□ -0.7
CIRBP-218ENST00000588344 HMGCS2P54868 508 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 KLRC3Q07444 240 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 USP17L24Q0WX57 530 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 SHROOM1Q2M3G4 852 aaPredicted RBP10.65□□□□□ -0.7
CIRBP-218ENST00000588344 IFIT1BQ5T764 474 aaKnown RBP10.65□□□□□ -0.7
CIRBP-218ENST00000588344 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 MB21D2Q8IYB1 491 aaPredicted RBP10.65□□□□□ -0.7
CIRBP-218ENST00000588344 RASEFQ8IZ41 740 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 GTF3C2Q8WUA4 911 aaPredicted RBP10.65□□□□□ -0.7
CIRBP-218ENST00000588344 PTPN18Q99952 460 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 CFHR5Q9BXR6 569 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 HOXC10Q9NYD6 342 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 NAV1Q8NEY1 1877 aa10.65□□□□□ -0.7
CIRBP-218ENST00000588344 MYH1P12882 1939 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 AK9Q5TCS8 1911 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 BTBD19C9JJ37 291 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 PDHXO00330 501 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 LIFRP42702 1097 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 MOGSQ13724 837 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 WTAPQ15007 396 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 GPAT2Q6NUI2 795 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 CCDC84Q86UT8 332 aaPredicted RBP10.64□□□□□ -0.71
CIRBP-218ENST00000588344 FBXL16Q8N461 479 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 ENAHQ8N8S7 591 aaPredicted RBP10.64□□□□□ -0.71
CIRBP-218ENST00000588344 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 GMCL1Q96IK5 515 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 PARK7Q99497 189 aaKnown RBP10.64□□□□□ -0.71
CIRBP-218ENST00000588344 TMEM47Q9BQJ4 181 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 KAT14Q9H8E8 782 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 ZFYVE28Q9HCC9 887 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 WBP1LQ9NX94 342 aa10.64□□□□□ -0.71
CIRBP-218ENST00000588344 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.64□□□□□ -0.71
CIRBP-218ENST00000588344 TNKSO95271 1327 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 PRC1O43663 620 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 PLA2G6O60733 806 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 SEC24BO95487 1268 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 FDX1P10109 184 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 GCLCP48506 637 aaPredicted RBP10.63□□□□□ -0.71
CIRBP-218ENST00000588344 IRX3P78415 501 aaPredicted RBP10.63□□□□□ -0.71
CIRBP-218ENST00000588344 FGD1P98174 961 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 EXOSC10Q01780 885 aaKnown RBP10.63□□□□□ -0.71
CIRBP-218ENST00000588344 COG2Q14746 738 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
CIRBP-218ENST00000588344 NOM1Q5C9Z4 860 aaKnown RBP10.63□□□□□ -0.71
CIRBP-218ENST00000588344 TMEM67Q5HYA8 995 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 SLFN13Q68D06 897 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 SYNE3Q6ZMZ3 975 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 CATSPERGQ6ZRH7 1159 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 IGDCC4Q8TDY8 1250 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 CHURC1Q8WUH1 139 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 DCAF4Q8WV16 495 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 JAKMIP1Q96N16 626 aaKnown RBP10.63□□□□□ -0.71
CIRBP-218ENST00000588344 ZIC5Q96T25 663 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 MAP3K14Q99558 947 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 BACH2Q9BYV9 841 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 FEM1BQ9UK73 627 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 CYP46A1Q9Y6A2 500 aa10.63□□□□□ -0.71
CIRBP-218ENST00000588344 CEP350Q5VT06 3117 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 MYPNQ86TC9 1320 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 CDK5RAP2Q96SN8 1893 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 IGF2BP3O00425 579 aaKnown RBP eCLIP10.62□□□□□ -0.71
CIRBP-218ENST00000588344 RAD21O60216 631 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 NMT2O60551 498 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 NDUFB10O96000 172 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 CALM1P0DP23 149 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 CALM2P0DP24 149 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 CALM3P0DP25 149 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 BMP3P12645 472 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 VCAM1P19320 739 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 CASTP20810 708 aaKnown RBP10.62□□□□□ -0.71
CIRBP-218ENST00000588344 SLC1A4P43007 532 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 RBM25P49756 843 aaKnown RBP10.62□□□□□ -0.71
CIRBP-218ENST00000588344 SEC23AQ15436 765 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
CIRBP-218ENST00000588344 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 CATIPQ7Z7H3 387 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 FAM160B2Q86V87 743 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 FAM43AQ8N2R8 423 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 MB21D1Q8N884 522 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 PRPF38AQ8NAV1 312 aaKnown RBP10.62□□□□□ -0.71
CIRBP-218ENST00000588344 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 C22orf23Q9BZE7 217 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 RPAP3Q9H6T3 665 aaPredicted RBP10.62□□□□□ -0.71
CIRBP-218ENST00000588344 RNF186Q9NXI6 227 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 TAF6LQ9Y6J9 622 aa10.62□□□□□ -0.71
CIRBP-218ENST00000588344 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 TLR2O60603 784 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 TRPA1O75762 1119 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 SNHG28P0DPA3 235 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms