RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 SLC6A17Q9H1V8 727 aa6.07□□□□□ -1.44
VPS4B-203ENST00000588323 KLHL3Q9UH77 587 aa6.07□□□□□ -1.44
VPS4B-203ENST00000588323 SMG5Q9UPR3 1016 aaKnown RBP6.07□□□□□ -1.44
VPS4B-203ENST00000588323 FAM221AA4D161 298 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 LRRN2O75325 713 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 PF4P02776 101 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 CTSHP09668 335 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 LINC00310P59036 64 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 LILRA6Q6PI73 481 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 TMC4Q7Z404 712 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 SPPL2CQ8IUH8 684 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 CCDC74BQ96LY2 380 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 KREMEN1Q96MU8 473 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 ASPNQ9BXN1 380 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 SP110Q9HB58 689 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 CWC22Q9HCG8 908 aaKnown RBP6.06□□□□□ -1.44
VPS4B-203ENST00000588323 REV1Q9UBZ9 1251 aa6.06□□□□□ -1.44
VPS4B-203ENST00000588323 NUAK1O60285 661 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 CHMP4BP1P59074 171 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 DUSP4Q13115 394 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 NR0B2Q15466 257 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 CLEC16AQ2KHT3 1053 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 TIGD5Q53EQ6 642 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 RELL1Q8IUW5 271 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 PHACTR4Q8IZ21 702 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 BAHD1Q8TBE0 780 aaPredicted RBP6.05□□□□□ -1.44
VPS4B-203ENST00000588323 CRELD1Q96HD1 420 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 FAM161BQ96MY7 647 aa6.05□□□□□ -1.44
VPS4B-203ENST00000588323 PRR36Q9H6K5 1346 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 RBM47A0AV96 593 aaKnown RBP6.04□□□□□ -1.44
VPS4B-203ENST00000588323 KRTAP9-7A8MTY7 169 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 CHURC1-FNTBB4DL54 471 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 GRIN3BO60391 1043 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 HTR3BO95264 441 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 GBP2P32456 591 aaPredicted RBP6.04□□□□□ -1.44
VPS4B-203ENST00000588323 CHRNEQ04844 493 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 SNAP47Q5SQN1 464 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 ZNF605Q86T29 641 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 RHOVQ96L33 236 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 TMEM74Q96NL1 305 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 ASCC2Q9H1I8 757 aaPredicted RBP6.04□□□□□ -1.44
VPS4B-203ENST00000588323 GPR160Q9UJ42 338 aa6.04□□□□□ -1.44
VPS4B-203ENST00000588323 YBX2Q9Y2T7 364 aaKnown RBP6.04□□□□□ -1.44
VPS4B-203ENST00000588323 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 PDE6BP35913 854 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 PWP1Q13610 501 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 MLECQ14165 292 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 SNX17Q15036 470 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 TMEM132EQ6IEE7 984 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 TTLL10Q6ZVT0 673 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 ANKS4BQ8N8V4 417 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 INTS4Q96HW7 963 aaKnown RBP6.03□□□□□ -1.44
VPS4B-203ENST00000588323 RSRP1Q9BUV0 290 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 MCOLN1Q9GZU1 580 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 MRS2Q9HD23 443 aa6.03□□□□□ -1.44
VPS4B-203ENST00000588323 POLR3KQ9Y2Y1 108 aaPredicted RBP6.03□□□□□ -1.44
VPS4B-203ENST00000588323 SORBS3O60504 671 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 PEX10O60683 326 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 SEMA7AO75326 666 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 INHBBP09529 407 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 DLG4P78352 724 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 TEKQ02763 1124 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 KIF2CQ99661 725 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 IRF2BPLQ9H1B7 796 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 VTI1BQ9UEU0 232 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 RAPGEFL1Q9UHV5 662 aa6.02□□□□□ -1.45
VPS4B-203ENST00000588323 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 GBP1P32455 592 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 ITGAEP38570 1179 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 FAM160A1Q05DH4 1040 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 MPP2Q14168 576 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 AEBP1Q8IUX7 1158 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 GOLM1Q8NBJ4 401 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 ENOX1Q8TC92 643 aaKnown RBP6.01□□□□□ -1.45
VPS4B-203ENST00000588323 EBF1Q9UH73 591 aa6.01□□□□□ -1.45
VPS4B-203ENST00000588323 TEX51A0A1B0GUA7 166 aa6□□□□□ -1.45
VPS4B-203ENST00000588323 MYOCOSA0A1B0GUC4 107 aa6□□□□□ -1.45
VPS4B-203ENST00000588323 PSPNO60542 156 aa6□□□□□ -1.45
VPS4B-203ENST00000588323 DNAJA2O60884 412 aa6□□□□□ -1.45
VPS4B-203ENST00000588323 RPL10P27635 214 aaKnown RBP6□□□□□ -1.45
VPS4B-203ENST00000588323 RNF4P78317 190 aa6□□□□□ -1.45
VPS4B-203ENST00000588323 NMIQ13287 307 aaPredicted RBP6□□□□□ -1.45
VPS4B-203ENST00000588323 DNAJC14Q6Y2X3 702 aaPredicted RBP6□□□□□ -1.45
VPS4B-203ENST00000588323 RNF111Q6ZNA4 994 aa6□□□□□ -1.45
VPS4B-203ENST00000588323 REC114Q7Z4M0 266 aa6□□□□□ -1.45
VPS4B-203ENST00000588323 ZNF552Q9H707 407 aaPredicted RBP6□□□□□ -1.45
VPS4B-203ENST00000588323 ADAMTS20P59510 1910 aa5.99□□□□□ -1.45
VPS4B-203ENST00000588323 B8ZZF3 427 aa5.99□□□□□ -1.45
VPS4B-203ENST00000588323 FBXO33Q7Z6M2 555 aa5.99□□□□□ -1.45
VPS4B-203ENST00000588323 FBXO27Q8NI29 283 aa5.99□□□□□ -1.45
VPS4B-203ENST00000588323 SYTL5Q8TDW5 730 aaPredicted RBP5.99□□□□□ -1.45
VPS4B-203ENST00000588323 LINC01599Q8WXQ3 324 aa5.99□□□□□ -1.45
VPS4B-203ENST00000588323 ZMYM5Q9UJ78 669 aa5.99□□□□□ -1.45
VPS4B-203ENST00000588323 CNOT6Q9ULM6 557 aaKnown RBP5.99□□□□□ -1.45
VPS4B-203ENST00000588323 SSU72P8A0A1W2PR75 194 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 PRRG2O14669 202 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 RGS13O14921 159 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 RAG1P15918 1043 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 GALK1P51570 392 aa5.98□□□□□ -1.45
VPS4B-203ENST00000588323 CWF19L2Q2TBE0 894 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms