RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SYCE3A1L190 88 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 USP17L3A6NCW0 530 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 USP17L4A6NCW7 530 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 SNAP23O00161 211 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 DHX16O60231 1041 aaKnown RBP6.72□□□□□ -1.33
SDF2-206ENST00000587788 PFKFB2O60825 505 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 UFL1O94874 794 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 CYP21A2P08686 494 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 CPA1P15085 419 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 KLRK1P26718 216 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 ARID4AP29374 1257 aaPredicted RBP6.72□□□□□ -1.33
SDF2-206ENST00000587788 HIBADHP31937 336 aaKnown RBP6.72□□□□□ -1.33
SDF2-206ENST00000587788 C1QTNF8P60827 252 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 FGD1P98174 961 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 TOB2Q14106 344 aaPredicted RBP6.72□□□□□ -1.33
SDF2-206ENST00000587788 LINC01559Q495D7 138 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 NAA16Q6N069 864 aaPredicted RBP6.72□□□□□ -1.33
SDF2-206ENST00000587788 USP17L2Q6R6M4 530 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 USP17L1Q7RTZ2 530 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 FBXO33Q7Z6M2 555 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 ZBTB33Q86T24 672 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 VPS37DQ86XT2 251 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 NIM1KQ8IY84 436 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 GTF3C6Q969F1 213 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 ZNF274Q96GC6 653 aaPredicted RBP6.72□□□□□ -1.33
SDF2-206ENST00000587788 AGXT2Q9BYV1 514 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 DBNDD1Q9H9R9 158 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 KCNQ5Q9NR82 932 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 ANKIB1Q9P2G1 1089 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 CFAP45Q9UL16 551 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 DENND2AQ9ULE3 1009 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 USTQ9Y2C2 406 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 MYO5AQ9Y4I1 1855 aaKnown RBP6.72□□□□□ -1.33
SDF2-206ENST00000587788 ZNF804BA4D1E1 1349 aa6.72□□□□□ -1.33
SDF2-206ENST00000587788 SHTN1A0MZ66 631 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 VPS37CA5D8V6 355 aaPredicted RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 RAD17O75943 681 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 LARGE1O95461 756 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 HSPD1P10809 573 aaKnown RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 VEGFAP15692 232 aaPredicted RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 SCNN1DP51172 638 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 EVCP57679 992 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 EXOSC10Q01780 885 aaKnown RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 CXCL9Q07325 125 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 MAP3K12Q12852 859 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 TRIM32Q13049 653 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 IMMTQ16891 758 aaKnown RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 IFFO2Q5TF58 517 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 SPTY2D1Q68D10 685 aaPredicted RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 Q6ZUG5 572 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 TXNRD3Q86VQ6 643 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 ZSCAN30Q86W11 494 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 NECAB1Q8N987 351 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 SPATA5Q8NB90 893 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 SUPT20HQ8NEM7 779 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 JDP2Q8WYK2 163 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 APPBP2Q92624 585 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 EDC3Q96F86 508 aaKnown RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 FAM84BQ96KN1 310 aaPredicted RBP6.71□□□□□ -1.34
SDF2-206ENST00000587788 VPS33BQ9H267 617 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 ZNRF3Q9ULT6 936 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 CNPY2Q9Y2B0 182 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 GJA3Q9Y6H8 435 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 XDHP47989 1333 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 IRS2Q9Y4H2 1338 aa6.71□□□□□ -1.34
SDF2-206ENST00000587788 MAGEB6P1A0A0J9YX57 407 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 GOLGA6L4A6NEF3 574 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 E7EWF7 191 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 H3BQV1 296 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 ECE2O60344 883 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 TOMM70O94826 608 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 CAVIN2O95810 425 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 SKIP12755 728 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 GGCXP38435 758 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 EIF6P56537 245 aaKnown RBP6.7□□□□□ -1.34
SDF2-206ENST00000587788 WNT7BP56706 349 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 ST3GAL1Q11201 340 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 ELOAQ14241 798 aaKnown RBP6.7□□□□□ -1.34
SDF2-206ENST00000587788 UBE3CQ15386 1083 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 TRAF7Q6Q0C0 670 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 RNF135Q8IUD6 432 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 GPC2Q8N158 579 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 SMARCC2Q8TAQ2 1214 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 EYA3Q99504 573 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 ZC3H12CQ9C0D7 883 aaKnown RBP6.7□□□□□ -1.34
SDF2-206ENST00000587788 GGA1Q9UJY5 639 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 MAST3O60307 1309 aa6.7□□□□□ -1.34
SDF2-206ENST00000587788 PDS5AQ29RF7 1337 aaKnown RBP6.7□□□□□ -1.34
SDF2-206ENST00000587788 PSMD14O00487 310 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 FIBPO43427 364 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 LZTS3O60299 673 aaPredicted RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 GADD45BO75293 160 aaPredicted RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 CCDC192P0DO97 292 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 MSNP26038 577 aaKnown RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 ADORA1P30542 326 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 EPS15P42566 896 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 ZAP70P43403 619 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 PHKA1P46020 1223 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms