RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CHMP4BP1P59074 171 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 TTC38Q5R3I4 469 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 GRAMD1CQ8IYS0 662 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 TXLNBQ8N3L3 684 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 ENAHQ8N8S7 591 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-206ENST00000587730 NGLY1Q96IV0 654 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 RWDD2AQ9UIY3 292 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 WNK3Q9BYP7 1800 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 TBC1D8O95759 1140 aa21.05■□□□□ 0.96
DDX39A-206ENST00000587730 ATP2B1P20020 1258 aa21.05■□□□□ 0.96
DDX39A-206ENST00000587730 RBL2Q08999 1139 aa21.05■□□□□ 0.96
DDX39A-206ENST00000587730 CCDC82Q8N4S0 544 aa21.05■□□□□ 0.96
DDX39A-206ENST00000587730 CCDC87Q9NVE4 849 aa21.05■□□□□ 0.96
DDX39A-206ENST00000587730 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 PPP1R3GB7ZBB8 358 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 EXOC5O00471 708 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 GTPBP6O43824 516 aaPredicted RBP21.04■□□□□ 0.96
DDX39A-206ENST00000587730 UBE4AQ14139 1066 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 HSP90AA4PQ58FG1 418 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 ARL6IP4Q66PJ3 421 aaKnown RBP21.04■□□□□ 0.96
DDX39A-206ENST00000587730 TMTC3Q6ZXV5 915 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 MIGA1Q8NAN2 632 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 TNFRSF25Q93038 417 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 PARD6BQ9BYG5 372 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 GBP3Q9H0R5 595 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 VPS54Q9P1Q0 977 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 DUOX1Q9NRD9 1551 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 LAMB2P55268 1798 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 CTAGE9A4FU28 777 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 CALML3P27482 149 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 GTF2E1P29083 439 aaPredicted RBP21.04■□□□□ 0.96
DDX39A-206ENST00000587730 CHRNDQ07001 517 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 WHAMMP3Q1A5X7 153 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 USP49Q70CQ1 688 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 CTCFLQ8NI51 663 aaPredicted RBP21.04■□□□□ 0.96
DDX39A-206ENST00000587730 EPSTI1Q96J88 318 aa21.04■□□□□ 0.96
DDX39A-206ENST00000587730 CDCA7Q9BWT1 371 aaPredicted RBP21.04■□□□□ 0.96
DDX39A-206ENST00000587730 ORC4O43929 436 aa21.03■□□□□ 0.96
DDX39A-206ENST00000587730 AFMP43652 599 aa21.03■□□□□ 0.96
DDX39A-206ENST00000587730 CYP26C1Q6V0L0 522 aa21.03■□□□□ 0.96
DDX39A-206ENST00000587730 RIOK1Q9BRS2 568 aaKnown RBP21.03■□□□□ 0.96
DDX39A-206ENST00000587730 MRPL44Q9H9J2 332 aaKnown RBP21.03■□□□□ 0.96
DDX39A-206ENST00000587730 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.03■□□□□ 0.96
DDX39A-206ENST00000587730 V9GY48 417 aaPredicted RBP21.03■□□□□ 0.96
DDX39A-206ENST00000587730 PDS5AQ29RF7 1337 aaKnown RBP21.03■□□□□ 0.96
DDX39A-206ENST00000587730 SOWAHDA6NJG2 315 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 MYL1P05976 194 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 USP5P45974 858 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 TROAPQ12815 778 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 SMC1AQ14683 1233 aaKnown RBP21.02■□□□□ 0.96
DDX39A-206ENST00000587730 KARSQ15046 597 aaKnown RBP21.02■□□□□ 0.96
DDX39A-206ENST00000587730 CAVIN4Q5BKX8 364 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 KLHL10Q6JEL2 608 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 DESI2Q9BSY9 194 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 ZNF652Q9Y2D9 606 aa21.02■□□□□ 0.96
DDX39A-206ENST00000587730 SLIT2O94813 1529 aa21.02■□□□□ 0.95
DDX39A-206ENST00000587730 A0A087X0B3 334 aa21.01■□□□□ 0.95
DDX39A-206ENST00000587730 TEX33O43247 280 aa21.01■□□□□ 0.95
DDX39A-206ENST00000587730 LONP1P36776 959 aaKnown RBP21.01■□□□□ 0.95
DDX39A-206ENST00000587730 PAK1Q13153 545 aa21.01■□□□□ 0.95
DDX39A-206ENST00000587730 RAD9BQ6WBX8 426 aa21.01■□□□□ 0.95
DDX39A-206ENST00000587730 CMTR1Q8N1G2 835 aaKnown RBP21.01■□□□□ 0.95
DDX39A-206ENST00000587730 SEC31BQ9NQW1 1179 aa21.01■□□□□ 0.95
DDX39A-206ENST00000587730 EIF3JO75822 258 aaKnown RBP21.01■□□□□ 0.95
DDX39A-206ENST00000587730 CD44P16070 742 aaKnown RBP21.01■□□□□ 0.95
DDX39A-206ENST00000587730 MSANTD4Q8NCY6 345 aa21.01■□□□□ 0.95
DDX39A-206ENST00000587730 RAB21Q9UL25 225 aa21.01■□□□□ 0.95
DDX39A-206ENST00000587730 N4BP3O15049 544 aa21■□□□□ 0.95
DDX39A-206ENST00000587730 NTSR2O95665 410 aa21■□□□□ 0.95
DDX39A-206ENST00000587730 KIF5BP33176 963 aa21■□□□□ 0.95
DDX39A-206ENST00000587730 E2F4Q16254 413 aa21■□□□□ 0.95
DDX39A-206ENST00000587730 ZNF658Q5TYW1 1059 aaPredicted RBP21■□□□□ 0.95
DDX39A-206ENST00000587730 FUT8Q9BYC5 575 aa21■□□□□ 0.95
DDX39A-206ENST00000587730 SH3GLB2Q9NR46 395 aa21■□□□□ 0.95
DDX39A-206ENST00000587730 PSD3Q9NYI0 1048 aa21■□□□□ 0.95
DDX39A-206ENST00000587730 H7C1D1 291 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 CAMTA2O94983 1202 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 PTGDRQ13258 359 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 PTPN21Q16825 1174 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 KIF4BQ2VIQ3 1234 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 ZNF772Q68DY9 489 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-206ENST00000587730 SDR42E1Q8WUS8 393 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 NAPGQ99747 312 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-206ENST00000587730 LZTFL1Q9NQ48 299 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 ST7Q9NRC1 585 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 CTNND2Q9UQB3 1225 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 DLEC1Q9Y238 1755 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 RREB1Q92766 1687 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 CICQ96RK0 1608 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-206ENST00000587730 CNTNAP5Q8WYK1 1306 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 ZBTB22O15209 634 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 RGL2O15211 777 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 GYPCP04921 128 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 SCG2P13521 617 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 CASP14P31944 242 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 LONRF2Q1L5Z9 754 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 INTS5Q6P9B9 1019 aaKnown RBP20.99■□□□□ 0.95
DDX39A-206ENST00000587730 HDXQ7Z353 690 aa20.99■□□□□ 0.95
DDX39A-206ENST00000587730 FNBP4Q8N3X1 1017 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-206ENST00000587730 ABCF2Q9UG63 623 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms